RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 LAMB2P55268 1798 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MAST2Q6P0Q8 1798 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CACNA1SQ13698 1873 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TANC1Q9C0D5 1861 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TNS2Q63HR2 1409 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 LTN1O94822 1766 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RGPD2P0DJD1 1756 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RGPD5Q99666 1765 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 COL24A1Q17RW2 1714 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP2D7A0A087X1C5 515 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 LINC00862A6NCI5 91 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SAGE2PA6NJ88 616 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 FAM159BA6NKW6 160 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF487B1APH4 448 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 H0YAE9 185 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 PDHXO00330 501 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SOCS2O14508 198 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CYB561D2O14569 222 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 NMT2O60551 498 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 PLIN3O60664 434 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 BANF1O75531 89 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TSPAN9O75954 239 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM63AO94886 807 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SEMA3DO95025 777 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RASAL1O95294 804 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 VNN1O95497 513 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TDP2O95551 362 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 OLFM2O95897 454 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 IGLV1-40P01703 118 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 F13BP05160 661 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GSNP06396 782 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GNAO1P09471 354 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 COL6A1P12109 1028 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ICAM2P13598 275 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ETS1P14921 441 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 KCNA6P17658 529 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GAP43P17677 238 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 NELFEP18615 380 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TCN1P20061 433 aaPredicted RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP3A5P20815 502 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RBL1P28749 1068 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CCND2P30279 289 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 AXLP30530 894 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SERPINB1P30740 379 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RPL22P35268 128 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 HADHAP40939 763 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ETV6P41212 452 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 MAGEA12P43365 314 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 HTR3AP46098 478 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC1A6P48664 564 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TNNI2P48788 182 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ALDH7A1P49419 539 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GABARAPL2P60520 117 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 COPZ1P61923 177 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 OTUD4Q01804 1114 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 OCA2Q04671 838 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GAD2Q05329 585 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ENPEPQ07075 957 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 NFIAQ12857 509 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GPS1Q13098 491 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 BAMBIQ13145 260 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CDK5R2Q13319 367 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ALCAMQ13740 583 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 NFIXQ14938 502 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 MFSD13AQ14CX5 517 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 C5orf22Q49AR2 442 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SEZ6Q53EL9 994 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CYBRD1Q53TN4 286 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 MTX3Q5HYI7 312 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 PRSS36Q5K4E3 855 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM201Q5SNT2 666 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ATAD3CQ5T2N8 411 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ABRAXAS1Q6UWZ7 409 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 HACD2Q6Y1H2 254 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 BBS12Q6ZW61 710 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 GDPD3Q7L5L3 318 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 NIPA1Q7RTP0 329 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 PIWIL3Q7Z3Z3 882 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 ZAR1Q86SH2 424 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 CAMK1DQ8IU85 385 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 RHOT1Q8IXI2 618 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 MRPL41Q8IXM3 137 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 KIAA2013Q8IYS2 634 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 UNC5BQ8IZJ1 945 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 MCOLN2Q8IZK6 566 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SFRP1Q8N474 314 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 KCNH5Q8NCM2 988 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 PAPD5Q8NDF8 572 aaKnown RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 PSD4Q8NDX1 1056 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 FBXO36Q8NEA4 188 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 NPLOC4Q8TAT6 608 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 DYNC2LI1Q8TCX1 351 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 JPH3Q8WXH2 748 aaPredicted RBP5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 LRTOMTQ8WZ04 291 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 FIG4Q92562 907 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SEPT8Q92599 483 aa5.32□□□□□ -1.56
LSM3P2-201ENST00000551246 SGCDQ92629 289 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms