RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CTNNAL1Q9UBT7 734 aa4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 SEC63Q9UGP8 760 aaKnown RBP4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 CHORDC1Q9UHD1 332 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 RPS6KA6Q9UK32 745 aa4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZNF711Q9Y462 761 aa4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 LSM4Q9Y4Z0 139 aaKnown RBP4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 SESN1Q9Y6P5 492 aa4.83□□□□□ -1.64
HMGB1P1-201ENST00000522557 ARHGEF40Q8TER5 1519 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 SYNDIG1LA6NDD5 238 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 A6NNC1 897 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 DKC1O60832 514 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 FTCDO95954 541 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 RB1P06400 928 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 TBXAS1P24557 533 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 EIF2DP41214 584 aaKnown RBP4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 SNX16P57768 344 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 CCDC184Q52MB2 194 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 C6orf141Q5SZD1 244 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 TDRPQ86YL5 185 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 RNF168Q8IYW5 571 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 GJC3Q8NFK1 279 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 CEP295NLQ96MC4 621 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 BBS4Q96RK4 519 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 WACQ9BTA9 647 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 SPRY4Q9C004 299 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 B3GNT4Q9C0J1 378 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 ESRP2Q9H6T0 727 aaKnown RBP4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 LTB4R2Q9NPC1 389 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 POT1Q9NUX5 634 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 IPO11Q9UI26 975 aaKnown RBP4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 MTMR6Q9Y217 621 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 NFE2L3Q9Y4A8 694 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 HS3ST3B1Q9Y662 390 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 SLC4A4Q9Y6R1 1079 aa4.82□□□□□ -1.64
HMGB1P1-201ENST00000522557 TCERG1O14776 1098 aaKnown RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 MDM4O15151 490 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 SLC25A17O43808 307 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 UGDHO60701 494 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 MMP2P08253 660 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 MMP3P08254 477 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 GLULP15104 373 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 GNLYP22749 145 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 PON1P27169 355 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 CHATP28329 748 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 SLC15A1P46059 708 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 POLGP54098 1239 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 FOXG1P55316 489 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 GOLGA8DPQ0D2H9 430 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 LPIN1Q14693 890 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 TWIST1Q15672 202 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 ADIPOQQ15848 244 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 DUSP6Q16828 381 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 SOWAHAQ2M3V2 549 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 TCTN1Q2MV58 587 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 CFAP58Q5T655 872 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 NCAPH2Q6IBW4 605 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 ANKRD54Q6NXT1 300 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 LCTLQ6UWM7 567 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZNF793Q6ZN11 406 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 ARFGAP1Q8N6T3 406 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 LRRC57Q8N9N7 239 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 HJURPQ8NCD3 748 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 CCDC191Q8NCU4 936 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 RASSF8Q8NHQ8 419 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 TRPC4APQ8TEL6 797 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 LRRC59Q96AG4 307 aaKnown RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 FBXL8Q96CD0 374 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 ELMOD3Q96FG2 381 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 WDR77Q9BQA1 342 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 SRSF8Q9BRL6 282 aaKnown RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 TRMOQ9BU70 441 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 TEX12Q9BXU0 123 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 FTOQ9C0B1 505 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 SH2D4AQ9H788 454 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 MAGEE1Q9HCI5 957 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 GIMAP4Q9NUV9 329 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 MSRB1Q9NZV6 116 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 PCDHA12Q9UN75 941 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 AAR2Q9Y312 384 aaKnown RBP4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 FAM96BQ9Y3D0 163 aa4.81□□□□□ -1.64
HMGB1P1-201ENST00000522557 A0A1W2PRQ8 180 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 MYMKA6NI61 221 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 EIF3CLB5ME19 914 aaKnown RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PROB1E7EW31 1015 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PRPF4O43172 522 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 KCNAB3O43448 404 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 NDUFS3O75489 264 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 IFNA2P01563 188 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PSG1P11464 419 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PCNAP12004 261 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 ETFAP13804 333 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 GCH1P30793 250 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 CLCN3P51790 818 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PPP5CP53041 499 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PNLIPRP2P54317 469 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 BAATQ14032 418 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 DRAP1Q14919 205 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 VEPH1Q14D04 833 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 PPP2R5BQ15173 497 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 KYNUQ16719 465 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms