RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 IFRD2Q12894 506 aaPredicted RBP12.75□□□□□ -0.37
DDR1-262ENST00000508312 E2F2Q14209 437 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 RFTN1Q14699 578 aaPredicted RBP12.75□□□□□ -0.37
DDR1-262ENST00000508312 MARCH8Q5T0T0 291 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 TAPT1Q6NXT6 567 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 USP33Q8TEY7 942 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 SGCDQ92629 289 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 RHOBTB2Q9BYZ6 727 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 WDR70Q9NW82 654 aa12.75□□□□□ -0.37
DDR1-262ENST00000508312 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 RECQL4O94761 1208 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 IL18RAPO95256 599 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 C2P06681 752 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 VDRP11473 427 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 BMP2P12643 396 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 SMPD1P17405 629 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 PSMA4P25789 261 aaKnown RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 BEX3Q00994 111 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 SOX4Q06945 474 aaPredicted RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 NIPAL4Q0D2K0 466 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 TAZQ16635 292 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 SAMD4BQ5PRF9 694 aaKnown RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 RSBN1Q5VWQ0 802 aaPredicted RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 IQCF2Q8IXL9 164 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ANKRD13AQ8IZ07 590 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 PDPRQ8NCN5 879 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 OR9I1Q8NGQ6 314 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ZNF669Q96BR6 464 aaPredicted RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 AGAP2Q99490 1192 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 PSD2Q9BQI7 771 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 C16orf70Q9BSU1 422 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDR1-262ENST00000508312 PIN4Q9Y237 131 aaKnown RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 DNAJC25-GNG10A0A024R161 153 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ILVBLA1L0T0 632 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 M0R3G1 203 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 SNPHO15079 494 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 GCATO75600 419 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 MFN2O95140 757 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ENDOUP21128 410 aaKnown RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 CAPGP40121 348 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 PHC1P78364 1004 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 RBP5P82980 135 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 TRIM32Q13049 653 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 INPP5AQ14642 412 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 IMPG1Q17R60 797 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 BROXQ5VW32 411 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 FSTL4Q6MZW2 842 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 UGT3A1Q6NUS8 523 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 PLEKHG7Q6ZR37 379 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 SFRP1Q8N474 314 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 DNAJB3Q8WWF6 145 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ZNF486Q96H40 463 aaPredicted RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 FEM1CQ96JP0 617 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 TBCBQ99426 244 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 OMDQ99983 421 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 C17orf80Q9BSJ5 609 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ATP13A3Q9H7F0 1226 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 DDX28Q9NUL7 540 aaKnown RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 SMPD3Q9NY59 655 aaPredicted RBP12.74□□□□□ -0.37
DDR1-262ENST00000508312 TLK1Q9UKI8 766 aa12.74□□□□□ -0.37
DDR1-262ENST00000508312 ALBP02768 609 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 PSMB4P28070 264 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 HOXA11P31270 313 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 PLA2G16P53816 162 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 HERC3Q15034 1050 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 CCNYL2Q5T2Q4 361 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 HFE2Q6ZVN8 426 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 CPSF7Q8N684 471 aaKnown RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 MFSD2AQ8NA29 543 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 TRIM8Q9BZR9 551 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 C9JVG2 144 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 BCAS1O75363 584 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.372e-10■■■□□ 15.1
DDR1-262ENST00000508312 ADSLP30566 484 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 TRPC1P48995 793 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 HLCSP50747 726 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 SURF1Q15526 300 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 CDKL3Q8IVW4 592 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 URGCPQ8TCY9 931 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 ZNF641Q96N77 438 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 MIR1-1HGQ9H1L0 117 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 TRIT1Q9H3H1 467 aaKnown RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 OXSMQ9NWU1 459 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 GPSM3Q9Y4H4 160 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 INPP4BO15327 924 aa12.73□□□□□ -0.37
DDR1-262ENST00000508312 RSL1D1O76021 490 aaKnown RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 NADKO95544 446 aaPredicted RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
DDR1-262ENST00000508312 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms