RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ITIH2P19823 946 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 SDHBP21912 280 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 BCKDHBP21953 392 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 VIPR1P32241 457 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 RALGDSQ12967 914 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 SRSF5Q13243 272 aaKnown RBP15.38■□□□□ 0.05
SEC13-215ENST00000477547 SLC36A4Q6YBV0 504 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 LINC00523Q86TU6 105 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 OR2T34Q8NGX1 318 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 GAB3Q8WWW8 586 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 CPT1BQ92523 772 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 SNF8Q96H20 258 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 SMIM14Q96QK8 99 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 WRAP53Q9BUR4 548 aaKnown RBP15.38■□□□□ 0.05
SEC13-215ENST00000477547 GPR174Q9BXC1 333 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 WSB2Q9NYS7 404 aaPredicted RBP15.38■□□□□ 0.05
SEC13-215ENST00000477547 MBD1Q9UIS9 605 aaPredicted RBP15.38■□□□□ 0.05
SEC13-215ENST00000477547 PCDHGA2Q9Y5H1 932 aa15.38■□□□□ 0.05
SEC13-215ENST00000477547 CHD8Q9HCK8 2581 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 TSPAN6O43657 245 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 SUN1O94901 812 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 ELFN1P0C7U0 828 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 TGM1P22735 817 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 LHCGRP22888 699 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 MAGEA6P43360 314 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 PPP2CBP62714 309 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 PPP2CAP67775 309 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 RPL6Q02878 288 aaKnown RBP15.37■□□□□ 0.05
SEC13-215ENST00000477547 PTPRRQ15256 657 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 ANKRD22Q5VYY1 191 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 RANBP10Q6VN20 620 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 PPIL6Q8IXY8 311 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 LRRN4CLQ8ND94 238 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 OR52K1Q8NGK4 314 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 CXorf40AQ8TE69 158 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 SCRN2Q96FV2 425 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 DPH5Q9H2P9 285 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 KDM4CQ9H3R0 1056 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 PARD6AQ9NPB6 346 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 PIH1D1Q9NWS0 290 aaKnown RBP15.37■□□□□ 0.05
SEC13-215ENST00000477547 SMG5Q9UPR3 1016 aaKnown RBP15.37■□□□□ 0.05
SEC13-215ENST00000477547 UTP11Q9Y3A2 253 aaKnown RBP15.37■□□□□ 0.05
SEC13-215ENST00000477547 PPIL1Q9Y3C6 166 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 ZNF711Q9Y462 761 aa15.37■□□□□ 0.05
SEC13-215ENST00000477547 CHD6Q8TD26 2715 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 USP24Q9UPU5 2620 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3DA0A087WVF3 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3IA0A087WXS9 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3EA0A087X179 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3KA0A087X1G2 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 C1orf232A0A0U1RR37 186 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TCRBV7S3A2A0A539 114 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3FA6NER0 549 aaPredicted RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 A8MX80 341 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 PRR5-ARHGAP8B1AHC4 643 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3LB9A6J9 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 MAP3K13O43283 966 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 RNGTTO60942 597 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 SEC31AO94979 1220 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 HEXIM1O94992 359 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 ADRB1P08588 477 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3HP0C7X1 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 HNF1BP35680 557 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 RPL21P46778 160 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 ARHGAP8P85298 464 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 CDK16Q00536 496 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 CDH17Q12864 832 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 ARHGEF7Q14155 803 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 CNGA3Q16281 694 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 RNASEH2BQ5TBB1 312 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 LRRC66Q68CR7 880 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3GQ6DHY5 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3CQ6IPX1 549 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 KIAA1161Q6NSJ0 714 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 CEP68Q76N32 757 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 LYSMD3Q7Z3D4 306 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TSPAN33Q86UF1 283 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 C11orf74Q86VG3 221 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 TBC1D3Q8IZP1 549 aaPredicted RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 GPR161Q8N6U8 529 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 DNAAF3Q8N9W5 541 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 ZBTB44Q8NCP5 570 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 BLOC1S5Q8TDH9 187 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 LYSMD1Q96S90 227 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 ERP44Q9BS26 406 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 RTKNQ9BST9 563 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 LRRC1Q9BTT6 524 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 C6orf106Q9H6K1 298 aaPredicted RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 TPX2Q9ULW0 747 aaKnown RBP15.36■□□□□ 0.05
SEC13-215ENST00000477547 SHOC2Q9UQ13 582 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 SPO11Q9Y5K1 396 aa15.36■□□□□ 0.05
SEC13-215ENST00000477547 A0A1W2PQU0 124 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 MEI4A8MW99 385 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 GOLGA8MH3BSY2 632 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 C6P13671 934 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 IVDP26440 423 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 CNR2P34972 360 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 GRIA1P42261 906 aa15.35■□□□□ 0.05
SEC13-215ENST00000477547 SLC7A5Q01650 507 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms