RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DRICH1Q6PGQ1 229 aaPredicted RBP11.67□□□□□ -0.54
LSM2-212ENST00000477182 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 CTAGE4Q8IX94 777 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 CEP112Q8N8E3 955 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 MNS1Q8NEH6 495 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 CYB5D2Q8WUJ1 264 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 SORCS1Q8WY21 1168 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 CCDC114Q96M63 670 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 SLC6A18Q96N87 628 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 DEPDC7Q96QD5 511 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 KRT12Q99456 494 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 ERVMER34-1Q9H9K5 563 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 PDFQ9HBH1 243 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 STARD5Q9NSY2 213 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 NCKAP1Q9Y2A7 1128 aa11.67□□□□□ -0.54
LSM2-212ENST00000477182 ZSCAN5CA6NGD5 496 aaPredicted RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 MATN3O15232 486 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 SUV39H1O43463 412 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 USP12O75317 370 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 PEX11BO96011 259 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 MT-CO1P00395 513 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 IGHV4-34P06331 123 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 CHRNA3P32297 505 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 FNTAP49354 379 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 STK19P49842 368 aaPredicted RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 CLCN6P51797 869 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 INHBCP55103 352 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 GDF10P55107 478 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 ECT2LQ008S8 904 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 SULT2A1Q06520 285 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 SFSWAPQ12872 951 aaKnown RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 KCTD19Q17RG1 926 aaPredicted RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 CCDC137Q6PK04 289 aaKnown RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 FAM71DQ8N9W8 422 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 LRRN4CLQ8ND94 238 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 NSMCE1Q8WV22 266 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 HTR3CQ8WXA8 447 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 TTC17Q96AE7 1141 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 RPL10LQ96L21 214 aaKnown RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 CEP41Q9BYV8 373 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 USP29Q9HBJ7 922 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 AASDHPPTQ9NRN7 309 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 UBA2Q9UBT2 640 aaPredicted RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 SLC25A13Q9UJS0 675 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 ERVW-1Q9UQF0 538 aa11.66□□□□□ -0.54
LSM2-212ENST00000477182 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
LSM2-212ENST00000477182 LRRK2Q5S007 2527 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 CFAP69A5D8W1 941 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 K7ERQ8 282 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 RNF103O00237 685 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 MTSS1O43312 755 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 CD160O95971 181 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 JCHAINP01591 159 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 ASLP04424 464 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 ATP5BP06576 529 aaKnown RBP11.65□□□□□ -0.54
LSM2-212ENST00000477182 CCNB1P14635 433 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 PTPN3P26045 913 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 RBMS1P29558 406 aaKnown RBP11.65□□□□□ -0.54
LSM2-212ENST00000477182 IFI35P80217 286 aaPredicted RBP11.65□□□□□ -0.54
LSM2-212ENST00000477182 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 WASHC5Q12768 1159 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 BNIP3Q12983 259 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 ZBTB17Q13105 803 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 LBRQ14739 615 aaKnown RBP11.65□□□□□ -0.54
LSM2-212ENST00000477182 PROX2Q3B8N5 592 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 TMCO4Q5TGY1 634 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 RETSATQ6NUM9 610 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 USP30Q70CQ3 517 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 EXD3Q8N9H8 876 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
LSM2-212ENST00000477182 ATL2Q8NHH9 583 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 MAML1Q92585 1016 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 FATE1Q969F0 183 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 ARHGAP9Q9BRR9 750 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 ASCL3Q9NQ33 180 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 PCYOX1Q9UHG3 505 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 AMACRQ9UHK6 382 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 TPX2Q9ULW0 747 aaKnown RBP11.65□□□□□ -0.54
LSM2-212ENST00000477182 SCML1Q9UN30 329 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 PLA2G4CQ9UP65 541 aa11.65□□□□□ -0.54
LSM2-212ENST00000477182 TLR4O00206 839 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 SMAD6O43541 496 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 NEBLO76041 1014 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 STK10O94804 968 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 TMCC1O94876 653 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 ECEL1O95672 775 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 IFNB1P01574 187 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 WNT1P04628 370 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 DLDP09622 509 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 SRCP12931 536 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 ETS1P14921 441 aa11.64□□□□□ -0.55
LSM2-212ENST00000477182 STIP1P31948 543 aaKnown RBP11.64□□□□□ -0.55
LSM2-212ENST00000477182 PTGIRP43119 386 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms