RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RAET1EQ8TD07 263 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ATG4CQ96DT6 458 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PDGFDQ9GZP0 370 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 GLTPQ9NZD2 209 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 COL20A1Q9P218 1284 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 FNIP2Q9P278 1114 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 IFT80Q9P2H3 777 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 AGTPBP1Q9UPW5 1226 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 COL1A2P08123 1366 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ASB14A6NK59 587 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TRIM49D1C9J1S8 452 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PIK3R2O00459 728 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF780AO75290 641 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 USP2O75604 605 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PDGFAP04085 211 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 BPGMP07738 259 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 DDOSTP39656 456 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CASP4P49662 377 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 BLVRAP53004 296 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 GCNT1Q02742 428 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 UBE3AQ05086 875 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 BAATQ14032 418 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CTF1Q16619 201 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 EPC2Q52LR7 807 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF773Q6PK81 442 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PLEKHM3Q6ZWE6 761 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ERMP1Q7Z2K6 904 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 DAW1Q8N136 415 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CCDC185Q8N715 623 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 RHOXF1Q8NHV9 184 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CYP2W1Q8TAV3 490 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TRPM4Q8TD43 1214 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 NKD2Q969F2 451 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 RIPOR3Q96MK2 946 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 NFKBIZQ9BYH8 718 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ALOXE3Q9BYJ1 711 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ITM2CQ9NQX7 267 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 SIRT5Q9NXA8 310 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 FAM8A1Q9UBU6 413 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 NUDT5Q9UKK9 219 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TBX20Q9UMR3 447 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 GJA3Q9Y6H8 435 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF541Q9H0D2 1346 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF98A6NK75 572 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 C2orf81A6NN90 581 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 H0Y858 1186 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF195O14628 629 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 NCAM2O15394 837 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TBX1O43435 398 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 B4GAT1O43505 415 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TRIM16O95361 564 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 HTR1BP28222 390 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 MAGEA11P43364 429 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ARSEP51690 589 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ARPP19P56211 112 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CCNA1P78396 465 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TOP3AQ13472 1001 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TRIM25Q14258 630 aaKnown RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 HIF1AQ16665 826 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PLA2G4EQ3MJ16 856 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 XKR9Q5GH70 373 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 FNBP1LQ5T0N5 605 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 KRT39Q6A163 491 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 KIAA1324Q6UXG2 1013 aaKnown RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 OR4M2Q8NGB6 313 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 OR4M1Q8NGD0 313 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 DACH2Q96NX9 599 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 UHRF1Q96T88 793 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 INTS2Q9H0H0 1204 aaKnown RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ADAMTS10Q9H324 1103 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 LRRC40Q9H9A6 602 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 DTLQ9NZJ0 730 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ARHGAP28Q9P2N2 729 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CACNG2Q9Y698 323 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 MN1Q10571 1320 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 E7ENX8 843 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 AP3D1O14617 1153 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 KPNA6O60684 536 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 HOXB3P14651 431 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 CYP2A7P20853 494 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 RPL9P32969 192 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ACTR2P61160 394 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 MXD4Q14582 209 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM132BQ14DG7 1078 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ACAP2Q15057 778 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ZMYND11Q15326 602 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TBRG1Q3YBR2 411 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TEDDM1Q5T9Z0 273 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM236Q5W0B7 351 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 C11orf96Q7Z7L8 435 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SLC22A15Q8IZD6 547 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ANKFN1Q8N957 763 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TDRD5Q8NAT2 981 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM161BQ8NDZ6 487 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 FBXO36Q8NEA4 188 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PNPT1Q8TCS8 783 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PCDHB18PQ96TA0 734 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms