RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 DDX3XO00571 662 aaKnown RBP eCLIP15.74■□□□□ 0.117e-38■■■□□ 15.3
NUCKS1-201ENST00000367142 ATG13O75143 517 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MATN4O95460 622 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 GRM5P41594 1212 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MRPS5P82675 430 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 ZNF155Q12901 538 aaPredicted RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 BNIP2Q12982 314 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 SF1Q15637 639 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 LEMD2Q8NC56 503 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 BPIFB6Q8NFQ5 453 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 KBTBD8Q8NFY9 601 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MAML3Q96JK9 1138 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 QKIQ96PU8 341 aaKnown RBP eCLIP15.74■□□□□ 0.112e-23■■■□□ 14.9
NUCKS1-201ENST00000367142 C1orf50Q9BV19 199 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 CDT1Q9H211 546 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 ARMCX1Q9P291 453 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 C3orf18Q9UK00 162 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 SORCS3Q9UPU3 1222 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 RHPN2P1A8MT19 583 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 ERVK-21P61565 698 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 PYDC2Q56P42 97 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 PTCD3Q96EY7 689 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MARK4Q96L34 752 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 AARSD1Q9BTE6 412 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 SGK2Q9HBY8 427 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 DDX4Q9NQI0 724 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 CLTCQ00610 1675 aaKnown RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 H3BM21 787 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SLC6A2P23975 617 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 VSIG10LQ86VR7 867 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SLC4A11Q8NBS3 891 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 ADAMTS15Q8TE58 950 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 RIPOR3Q96MK2 946 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 TRNT1Q96Q11 434 aaKnown RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 GPER1Q99527 375 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 BRINP2Q9C0B6 783 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SPAG4Q9NPE6 437 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 ERVW-1Q9UQF0 538 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SPATA31D3P0C874 917 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 OR1D2P34982 312 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 RTL4Q6ZR62 310 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SPATA31D4Q6ZUB0 917 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SPPL2BQ8TCT7 592 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 GGA2Q9UJY4 613 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 TCEA3O75764 348 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 RNASEH2AO75792 299 aaKnown RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 UGT2B17O75795 530 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 ALAS2P22557 587 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 FGFR3P22607 806 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 CCR3P51677 355 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 MON1AQ86VX9 555 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 GALNT13Q8IUC8 556 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 EXOC2Q96KP1 924 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 RFXANKO14593 260 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 CLDN11O75508 207 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SELPP16109 830 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 KCNA5P22460 613 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 CHN2P52757 468 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 STXBP1P61764 594 aaKnown RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 MBTD1Q05BQ5 628 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 TCEAL6Q6IPX3 200 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 CHST9Q7L1S5 443 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 FAM35AQ86V20 835 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 ZNF540Q8NDQ6 660 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 FNIP1Q8TF40 1166 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 MBOAT7Q96N66 472 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 RNF157Q96PX1 679 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 LRRC72A6NJI9 287 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 RASGRP1O95267 797 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 OGNP20774 298 aaKnown RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 BCAP31P51572 246 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 ATXN7L2Q5T6C5 722 aaPredicted RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 PRCCQ92733 491 aaPredicted RBP15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SPATA9Q9BWV2 254 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 DERAQ9Y315 318 aa15.73■□□□□ 0.11
NUCKS1-201ENST00000367142 SUV39H1O43463 412 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 PTPN9P43378 593 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 ARF5P84085 180 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 C9orf64Q5T6V5 341 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 BROXQ5VW32 411 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 OLFML2AQ68BL7 652 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 DUSP16Q9BY84 665 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TMEM27Q9HBJ8 222 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CHST7Q9NS84 486 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 A0A1W2PQ67 120 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 FAM86C2PA6NEL3 165 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TMEM88BA6NKF7 163 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 PCCBP05166 539 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CYP1A2P05177 515 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 MAPK10P53779 464 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 SNX20Q7Z614 316 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 ZNF483Q8TF39 744 aaPredicted RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 EPB41L1Q9H4G0 881 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 HCN3Q9P1Z3 774 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 COL1A2P08123 1366 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 PRNPP04156 253 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms