RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ATP6V0D1P61421 351 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CYP4F2P78329 520 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CYP4F3Q08477 520 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 OTOP3Q7RTS5 596 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CLEC4MQ9H2X3 399 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 NOL6Q9H6R4 1146 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 AGO3Q9H9G7 860 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 DIABLOQ9NR28 239 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 GSTK1Q9Y2Q3 226 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 VWA7Q9Y334 891 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 ZNF780BQ9Y6R6 833 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 BAZ2BQ9UIF8 2168 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 SMIM28A0A1B0GU29 152 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 GRM6O15303 877 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 SCN2BO60939 215 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 RTP1P59025 263 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 PACS1Q6VY07 963 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 FBXW8Q8N3Y1 598 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 NUAK2Q9H093 628 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CORO2BQ9UQ03 480 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 TCRBV9S1A1TA0A576 114 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 RGSL1A5PLK6 1076 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 OR10H3O60404 316 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CORO1AP31146 461 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 RPL3P39023 403 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 ELF3P78545 371 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 PSRC1Q6PGN9 363 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 ALYREFQ86V81 257 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 AARSD1Q9BTE6 412 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 HTATIP2Q9BUP3 242 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 FNDC11Q9BVV2 318 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 GULP1Q9UBP9 304 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 KIF20BQ96Q89 1820 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 TREHO43280 583 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 ASNA1O43681 348 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 SNX3O60493 162 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 TSHRP16473 764 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CES1P23141 567 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 NDUFAF6Q330K2 333 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 RHBDF2Q6PJF5 856 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 PIWIL4Q7Z3Z4 852 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 IRF2BP2Q7Z5L9 587 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 OR52E6Q96RD3 313 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 ELL3Q9HB65 397 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 OGDHLQ9ULD0 1010 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 TRBV23OR9-2A0A075B6M9 112 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 SLC28A2O43868 658 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 GCATO75600 419 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CXCR3P49682 368 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 SRP54P61011 504 aaKnown RBP13.24□□□□□ -0.29
SCN8A-202ENST00000355133 TAPT1Q6NXT6 567 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 RCN3Q96D15 328 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 GINS4Q9BRT9 223 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 TTLL2Q9BWV7 592 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 GLOD4Q9HC38 313 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 EHD3Q9NZN3 535 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 C15orf41Q9Y2V0 281 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 DERAQ9Y315 318 aa13.24□□□□□ -0.29
SCN8A-202ENST00000355133 A0A1W2PPM1 405 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 RFXANKO14593 260 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 CST1P01037 141 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 GABRB2P47870 512 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 TATDN1Q6P1N9 297 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ARCQ7LC44 396 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 NET1Q7Z628 596 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 FLCNQ8NFG4 579 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ACMSDQ8TDX5 336 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 SLC38A2Q96QD8 506 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 CERS4Q9HA82 394 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PNPOQ9NVS9 261 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 BTBD19C9JJ37 291 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 TRIM38O00635 465 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 HDAC3O15379 428 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ITGA2P17301 1181 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 TNFRSF8P28908 595 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PSMD8P48556 350 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 BMT2Q1RMZ1 405 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 RFWD3Q6PCD5 774 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 TMC5Q6UXY8 1006 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 HIPK1Q86Z02 1210 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 KIFC1Q9BW19 673 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PNMA8CA0A1B0GUJ8 204 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 WNT7AO00755 349 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 AP3D1O14617 1153 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 CCNE2O96020 404 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 SELPP16109 830 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 RHAGQ02094 409 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 LPIN1Q14693 890 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 KCNA10Q16322 511 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 CLHC1Q8NHS4 586 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms