RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
AFF3-201ENST00000317233 ZNF700Q9H0M5 742 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 SEC14L3Q9UDX4 400 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 GABBR2O75899 941 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 LAMP2P13473 410 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 RCAN1P53805 252 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 PER3P56645 1201 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TYSND1Q2T9J0 566 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 FAM153CQ494X1 144 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TMPRSS6Q8IU80 811 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
AFF3-201ENST00000317233 EDEM1Q92611 657 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 SLC25A23Q9BV35 468 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TRPS1Q9UHF7 1281 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 TRHDEQ9UKU6 1024 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 ACTL7BQ9Y614 415 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 IFNA21P01568 189 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 MCAMP43121 646 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 NPTX2P47972 431 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 SLC6A9P48067 706 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 CLCN7P51798 805 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 SCARF1Q14162 830 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 C9orf64Q5T6V5 341 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 ANXA8L1Q5VT79 327 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 C3orf33Q6P1S2 294 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 ARSKQ6UWY0 536 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 CIDECQ96AQ7 238 aaPredicted RBP13.21□□□□□ -0.29
AFF3-201ENST00000317233 PARPBPQ9NWS1 579 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 PALLDQ8WX93 1383 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 ASCC3Q8N3C0 2202 aaKnown RBP13.21□□□□□ -0.29
AFF3-201ENST00000317233 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
AFF3-201ENST00000317233 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 TTPAP49638 278 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 RAB27AP51159 221 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 UBE2Q1Q7Z7E8 422 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 PAFAH2Q99487 392 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 PCDHGC3Q9UN70 934 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 A0A087X0B3 334 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 LINGO3P0C6S8 592 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 ZNF16P17020 682 aaPredicted RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 DDX6P26196 483 aaKnown RBP eCLIP13.21□□□□□ -0.3
AFF3-201ENST00000317233 CBX2Q14781 532 aaPredicted RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 ZC2HC1CQ53FD0 456 aaPredicted RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 DUS1LQ6P1R4 473 aaKnown RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 STAG3L4Q8TBR4 150 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 NINJ1Q92982 152 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 RFKQ969G6 155 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 ZSWIM3Q96MP5 696 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 ZMYM2Q9UBW7 1377 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 CAPN14A8MX76 684 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 H3BM21 787 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 CST1P01037 141 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 CDH3P22223 829 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 HSD11B1P28845 292 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 E2F2Q14209 437 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 IQSEC1Q6DN90 963 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 FBXO33Q7Z6M2 555 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 METTL3Q86U44 580 aaKnown RBP13.21□□□□□ -0.3
AFF3-201ENST00000317233 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.3
AFF3-201ENST00000317233 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 BGNP21810 368 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 PTPN4P29074 926 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 ARFRP1Q13795 201 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 PANX1Q96RD7 426 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 SLC16A8O95907 504 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 RAB4AP20338 218 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 CDH8P55286 799 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 INAVAQ3KP66 663 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 OR8H3Q8N146 312 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 PMEPA1Q969W9 287 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 TUBA8Q9NY65 449 aaPredicted RBP13.2□□□□□ -0.3
AFF3-201ENST00000317233 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 ZNF726A6NNF4 738 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 H0YGN5 161 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 SERPINE1P05121 402 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 LHCGRP22888 699 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 TAS2R50P59544 299 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 ORC1Q13415 861 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 ZIK1Q3SY52 487 aaPredicted RBP13.2□□□□□ -0.3
AFF3-201ENST00000317233 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
AFF3-201ENST00000317233 BORCS7Q96B45 105 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms