RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 P3H4Q92791 437 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 HAUS1Q96CS2 278 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 CEP41Q9BYV8 373 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 TSGA10Q9BZW7 698 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 MBNL1Q9NR56 388 aaKnown RBP15.27■□□□□ 0.04
ACTN1-217ENST00000556203 AMFRQ9UKV5 643 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 PCOLCE2Q9UKZ9 415 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 PHTF1Q9UMS5 762 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 BTBD3Q9Y2F9 522 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 SPTBN4Q9H254 2564 aa15.27■□□□□ 0.03
ACTN1-217ENST00000556203 CFAP69A5D8W1 941 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 CBFA2T3O75081 653 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 FTCDO95954 541 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 ITGAVP06756 1048 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PDHA1P08559 390 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 ELFN1P0C7U0 828 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 EPHA8P29322 1005 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PEX5P50542 639 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PFN3P60673 137 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 COPS2P61201 443 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 FOXK2Q01167 660 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PDE1CQ14123 709 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 LRRC14Q15048 493 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 WSCD2Q2TBF2 565 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 LIPIQ6XZB0 460 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 BBS12Q6ZW61 710 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 DCP2Q8IU60 420 aaKnown RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 LRRC8AQ8IWT6 810 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 RHBDD1Q8TEB9 315 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 SAP25Q8TEE9 199 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 TFB1MQ8WVM0 346 aaKnown RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PIH1D2Q8WWB5 315 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 ALG3Q92685 438 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 AGAP3Q96P47 875 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 TDRD1Q9BXT4 1180 aaKnown RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 GPR27Q9NS67 375 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 PACSIN2Q9UNF0 486 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 CAPN6Q9Y6Q1 641 aa15.26■□□□□ 0.03
ACTN1-217ENST00000556203 ASCC3Q8N3C0 2202 aaKnown RBP15.26■□□□□ 0.03
ACTN1-217ENST00000556203 LAMA1P25391 3075 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 GOLGA8CPA6NN73 597 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 FZD6O60353 706 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 SDC3O75056 442 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 ADRB1P08588 477 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 CYP2A6P11509 494 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-217ENST00000556203 CTPS1P17812 591 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 CA4P22748 312 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 NFKBIAP25963 317 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 VIPR1P32241 457 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 CD86P42081 329 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 GRK6P43250 576 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 SIM1P81133 766 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-217ENST00000556203 BNIP3Q12983 259 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 PTPRRQ15256 657 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 TRIP6Q15654 476 aaKnown RBP15.25■□□□□ 0.03
ACTN1-217ENST00000556203 INAVAQ3KP66 663 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 CCDC181Q5TID7 509 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 USP45Q70EL2 814 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 ZC3H18Q86VM9 953 aaKnown RBP15.25■□□□□ 0.03
ACTN1-217ENST00000556203 RNF10Q8N5U6 811 aaKnown RBP15.25■□□□□ 0.03
ACTN1-217ENST00000556203 HERPUD2Q9BSE4 406 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 OSBPL8Q9BZF1 889 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 CHKBQ9Y259 395 aa15.25■□□□□ 0.03
ACTN1-217ENST00000556203 SPTY2D1-AS1A0A0U1RR47 76 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 NPIPB15A6NHN6 443 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-217ENST00000556203 RECQL5O94762 991 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-217ENST00000556203 HEXIM1O94992 359 aaKnown RBP15.24■□□□□ 0.03
ACTN1-217ENST00000556203 PCCBP05166 539 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 MMP2P08253 660 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 ALPIP09923 528 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 PYGMP11217 842 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 GM2AP17900 193 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 LHCGRP22888 699 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 PTPN3P26045 913 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 PTPN7P35236 360 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 EPHB1P54762 984 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 SKOR1P84550 965 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 FZD2Q14332 565 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 ACOX1Q15067 660 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 AGERQ15109 404 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 CNGA3Q16281 694 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 TEX44Q53QW1 395 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 ZNF542PQ5EBM4 170 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 TPRG1LQ5T0D9 272 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 DENND2CQ68D51 928 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 AADACL2Q6P093 401 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 PARGQ86W56 976 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 NDUFAF2Q8N183 169 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 UBL4BQ8N7F7 174 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 LPCAT1Q8NF37 534 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 BAHD1Q8TBE0 780 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-217ENST00000556203 SCRN2Q96FV2 425 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 MCCC1Q96RQ3 725 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-217ENST00000556203 CAAP1Q9H8G2 361 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 PCDH9Q9HC56 1237 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 DNAJC28Q9NX36 388 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 GUCA1BQ9UMX6 200 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 EFR3BQ9Y2G0 817 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms