RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 RIOK3O14730 519 aaKnown RBP18.42■□□□□ 0.54
TSSC4-210ENST00000496468 NDC80O14777 642 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 NDUFS2O75306 463 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 RPP40O75818 363 aaKnown RBP18.42■□□□□ 0.54
TSSC4-210ENST00000496468 TMEM63AO94886 807 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 VIPR1P32241 457 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 CDK16Q00536 496 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 ANKRD22Q5VYY1 191 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 RANBP10Q6VN20 620 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 SLC36A4Q6YBV0 504 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 PCGF5Q86SE9 256 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 PPIL6Q8IXY8 311 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 OR2T34Q8NGX1 318 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 CXorf40AQ8TE69 158 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 GAB3Q8WWW8 586 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 NELL1Q92832 810 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 PRRX2Q99811 253 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 ERP44Q9BS26 406 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 WSB2Q9NYS7 404 aaPredicted RBP18.42■□□□□ 0.54
TSSC4-210ENST00000496468 TPX2Q9ULW0 747 aaKnown RBP18.42■□□□□ 0.54
TSSC4-210ENST00000496468 PPIL1Q9Y3C6 166 aa18.42■□□□□ 0.54
TSSC4-210ENST00000496468 TCRBV7S3A2A0A539 114 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 TSPAN6O43657 245 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 SEC31AO94979 1220 aaKnown RBP18.41■□□□□ 0.54
TSSC4-210ENST00000496468 HEXIM1O94992 359 aaKnown RBP18.41■□□□□ 0.54
TSSC4-210ENST00000496468 PCDH8O95206 1070 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 SLC4A1P02730 911 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 ELFN1P0C7U0 828 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 PIRTP0C851 137 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 ITIH2P19823 946 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 SEMG2Q02383 582 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 CDH17Q12864 832 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 RALGDSQ12967 914 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 RNASEH2BQ5TBB1 312 aaKnown RBP18.41■□□□□ 0.54
TSSC4-210ENST00000496468 C11orf74Q86VG3 221 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 HOOK3Q86VS8 718 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 FRMD1Q8N878 549 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 DNAAF3Q8N9W5 541 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 LRRN4CLQ8ND94 238 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 SCRN2Q96FV2 425 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 SMIM14Q96QK8 99 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 LRRC1Q9BTT6 524 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 WRAP53Q9BUR4 548 aaKnown RBP18.41■□□□□ 0.54
TSSC4-210ENST00000496468 GPR174Q9BXC1 333 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 DPH5Q9H2P9 285 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 MBD1Q9UIS9 605 aaPredicted RBP18.41■□□□□ 0.54
TSSC4-210ENST00000496468 ZNF711Q9Y462 761 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 PCDHGA2Q9Y5H1 932 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 MYLKQ15746 1914 aa18.41■□□□□ 0.54
TSSC4-210ENST00000496468 C1orf232A0A0U1RR37 186 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 BCKDHBP21953 392 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 LHCGRP22888 699 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 HNF1BP35680 557 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 RPL21P46778 160 aaKnown RBP18.4■□□□□ 0.54
TSSC4-210ENST00000496468 PPP2CBP62714 309 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 PPP2CAP67775 309 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 SARNPP82979 210 aaKnown RBP18.4■□□□□ 0.54
TSSC4-210ENST00000496468 RPL6Q02878 288 aaKnown RBP18.4■□□□□ 0.54
TSSC4-210ENST00000496468 ARHGEF7Q14155 803 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 TMEM52BQ4KMG9 183 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 GLE1Q53GS7 698 aaKnown RBP18.4■□□□□ 0.54
TSSC4-210ENST00000496468 LRRC66Q68CR7 880 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 KIAA1161Q6NSJ0 714 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 GLT6D1Q7Z4J2 308 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 NAT8LQ8N9F0 302 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 OR52K1Q8NGK4 314 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 BLOC1S5Q8TDH9 187 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 LYSMD1Q96S90 227 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 SRPK1Q96SB4 655 aaKnown RBP18.4■□□□□ 0.54
TSSC4-210ENST00000496468 ARNT2Q9HBZ2 717 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 PIH1D1Q9NWS0 290 aaKnown RBP18.4■□□□□ 0.54
TSSC4-210ENST00000496468 SHOC2Q9UQ13 582 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 SNX24Q9Y343 169 aa18.4■□□□□ 0.54
TSSC4-210ENST00000496468 TBC1D3DA0A087WVF3 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3IA0A087WXS9 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3EA0A087X179 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3KA0A087X1G2 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3FA6NER0 549 aaPredicted RBP18.39■□□□□ 0.53
TSSC4-210ENST00000496468 A8MX80 341 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3LB9A6J9 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 H0Y858 1186 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 MAP3K13O43283 966 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 RNGTTO60942 597 aaKnown RBP18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3HP0C7X1 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 ZNF30P17039 623 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 IVDP26440 423 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 CNR2P34972 360 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 SLC7A5Q01650 507 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 CALCOCO2Q13137 446 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 SRSF5Q13243 272 aaKnown RBP18.39■□□□□ 0.53
TSSC4-210ENST00000496468 MORF4L2Q15014 288 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 PTPRRQ15256 657 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 CNGA3Q16281 694 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 DUPD1Q68J44 220 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3GQ6DHY5 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TBC1D3CQ6IPX1 549 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 DENND5AQ6IQ26 1287 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 NEK5Q6P3R8 708 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TSPAN33Q86UF1 283 aa18.39■□□□□ 0.53
TSSC4-210ENST00000496468 TRIM69Q86WT6 500 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms