RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ZNF662Q6ZS27 426 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 PEX26Q7Z412 305 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 PARGQ86W56 976 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 RBFAQ8N0V3 343 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 PGBD5Q8N414 524 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 HCAR2Q8TDS4 363 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 FUBP1Q96AE4 644 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 ZNF641Q96N77 438 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 PSKH2Q96QS6 385 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 GOLPH3Q9H4A6 298 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 CCDC86Q9H6F5 360 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 PCDH18Q9HCL0 1135 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 DONSONQ9NYP3 566 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 DKK4Q9UBT3 224 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 ALG6Q9Y672 507 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 ANKRD36A6QL64 1941 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 H3BRJ5 948 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 KIF5CO60282 957 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 MAFKO60675 156 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 GCATO75600 419 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 TM7SF2O76062 418 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 CKMT1AP12532 417 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 C6P13671 934 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 GM2AP17900 193 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 MSNP26038 577 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 LIG3P49916 1009 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 SUOXP51687 545 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 ZNF135P52742 658 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 INSM1Q01101 510 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 TARDBPQ13148 414 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 ILKQ13418 452 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 KRT81Q14533 505 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 IRF4Q15306 451 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 HES3Q5TGS1 186 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 KCTD16Q68DU8 428 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 KCTD6Q8NC69 237 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 FAM71BQ8TC56 605 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 TEKT4Q8WW24 435 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 APOLD1Q96LR9 279 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 TUBGCP5Q96RT8 1024 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 SP110Q9HB58 689 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 NLGN3Q9NZ94 848 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 RAXQ9Y2V3 346 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 URB1O60287 2271 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 BPTFQ12830 3046 aa12.78□□□□□ -0.36
SEC61A1-206ENST00000491668 GRID2IPA4D2P6 1211 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 FTCDO95954 541 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 CDK4P11802 303 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 JUNDP17535 347 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 CR2P20023 1033 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 ARL4AP40617 200 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 TAS2R40P59535 323 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 HNRNPKP61978 463 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 MMRN1Q13201 1228 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 IHHQ14623 411 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 RFTN1Q14699 578 aaPredicted RBP12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 GRM3Q14832 879 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 BRAT1Q6PJG6 821 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 MAP7D3Q8IWC1 876 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 REXO1L1PQ8IX06 675 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 LZTR1Q8N653 840 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 DCBLD1Q8N8Z6 715 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 FAM181AQ8N9Y4 354 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 CXorf40AQ8TE69 158 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 CINPQ9BW66 212 aaPredicted RBP12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 DDX56Q9NY93 547 aaKnown RBP12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 CAPN6Q9Y6Q1 641 aa12.77□□□□□ -0.37
SEC61A1-206ENST00000491668 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 LRP4O75096 1905 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CASC3O15234 703 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 KRT1P04264 644 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CELA2BP08218 269 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 JUPP14923 745 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 SCNN1BP51168 640 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CDH6P55285 790 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 YPEL5P62699 121 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 ELP6Q0PNE2 266 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 LBRQ14739 615 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 LRRC14Q15048 493 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 AGERQ15109 404 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 LRRC38Q5VT99 294 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 MACC1Q6ZN28 852 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms