RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FZD6O60353 706 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 NDUFS2O75306 463 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 RNASEH2AO75792 299 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 THBS1P07996 1170 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 MMP2P08253 660 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 KRT7P08729 469 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 TPM1P09493 284 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ADRB3P13945 408 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 PECAM1P16284 738 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 LHCGRP22888 699 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CCNCP24863 283 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CA5AP35218 305 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CTSKP43235 329 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 MAGEA1P43355 309 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ID4P47928 161 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 PEX5P50542 639 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 AFF3P51826 1226 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 CDH6P55285 790 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CLDN6P56747 220 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CCZ1BP86790 482 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CCZ1P86791 482 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 OVGP1Q12889 678 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ZBTB17Q13105 803 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 HNRNPDQ14103 355 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 GRM3Q14832 879 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 HADHQ16836 314 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 ARSJQ5FYB0 599 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 PPP6R3Q5H9R7 873 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 IL31Q6EBC2 164 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 C11orf63Q6NUN7 778 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 C16orf46Q6P387 395 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 NPNTQ6UXI9 565 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 GCNT7Q6ZNI0 430 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ZNF662Q6ZS27 426 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 RFLNAQ6ZTI6 216 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ABI3BPQ7Z7G0 1075 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 GLRX5Q86SX6 157 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 HORMAD1Q86X24 394 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ZCCHC9Q8N567 271 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 MFSD2AQ8NA29 543 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 NBEAQ8NFP9 2946 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 NANOS1Q8WY41 292 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 ALG3Q92685 438 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 TADA1Q96BN2 335 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CENPTQ96BT3 561 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ZNF837Q96EG3 531 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 BMFQ96LC9 184 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CCDC114Q96M63 670 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ZNF641Q96N77 438 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 CAMK1GQ96NX5 476 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 OLFM3Q96PB7 478 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 RNF157Q96PX1 679 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 TUBGCP5Q96RT8 1024 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 IL12RB2Q99665 862 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 MGME1Q9BQP7 344 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 SPON2Q9BUD6 331 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 KCNF1Q9H3M0 494 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 TM9SF3Q9HD45 589 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 CTTNBP2NLQ9P2B4 639 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 HECAQ9UBI9 543 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 EIF2B4Q9UI10 523 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 IPO11Q9UI26 975 aaKnown RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 HPCAL4Q9UM19 191 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 DMTF1Q9Y222 760 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 NCKAP1Q9Y2A7 1128 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 PCDHGB2Q9Y5G2 931 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 PCDHA13Q9Y5I0 950 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 PCYT1BQ9Y5K3 369 aaPredicted RBP5.78□□□□□ -1.48
CUX1-208ENST00000485792 HS3ST3A1Q9Y663 406 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ALG6Q9Y672 507 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 ANKRD12Q6UB98 2062 aa5.78□□□□□ -1.48
CUX1-208ENST00000485792 APC2O95996 2303 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 LY6G6EA0A0G2JKS1 128 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 TCRBV7S2A1N4TA0A589 114 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 DCDC2BA2VCK2 349 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GRID2IPA4D2P6 1211 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 FAM221BA6H8Z2 402 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 C4orf47A7E2U8 309 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 KCNK3O14649 394 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 MATN3O15232 486 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 PSTPIP1O43586 416 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 TSPAN6O43657 245 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 BUB1O43683 1085 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 DFNA5O60443 496 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 PRLP01236 227 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SYPP08247 313 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 CEACAM1P13688 526 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GNSP15586 552 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 PRLRP16471 622 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 COMTP21964 271 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 PTPN7P35236 360 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SERPINB6P35237 376 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GJC1P36383 396 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 HSPA9P38646 679 aaKnown RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 ARL4AP40617 200 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GARSP41250 739 aaKnown RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 CDKN2BP42772 138 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 RXRGP48443 463 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 NEK3P51956 506 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms