RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 CAPN11Q9UMQ6 739 aa-0.4□□□□□ -2.47
TRAJ53-201ENST00000390485 PAXBP1Q9Y5B6 917 aa-0.4□□□□□ -2.47
TRAJ53-201ENST00000390485 PCDHB7Q9Y5E2 793 aa-0.4□□□□□ -2.47
TRAJ53-201ENST00000390485 KIF26AQ9ULI4 1882 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ53-201ENST00000390485 A0A087X0B3 334 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 FAM157AC9JC47 383 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 SOCS6O14544 535 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 SLC22A2O15244 555 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 IDH3BO43837 385 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 CTSVO60911 334 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 RAF1P04049 648 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 HMBSP08397 361 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 S1PR1P21453 382 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 ITGA3P26006 1051 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 METAP2P50579 478 aaKnown RBP eCLIP-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 CYP2J2P51589 502 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 CLCNKBP51801 687 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 ADKP55263 362 aaKnown RBP-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 EEF1A1P68104 462 aaKnown RBP-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 FAM27E3Q08E93 113 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 ITGADQ13349 1161 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 KLF1Q13351 362 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 KCNAB1Q14722 419 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 EEF1A1P5Q5VTE0 462 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 RNLSQ5VYX0 342 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 TFAP2EQ6VUC0 442 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 KRBA2Q6ZNG9 492 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 C14orf80Q86SX3 495 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 MICU3Q86XE3 530 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 LSMEM2Q8N112 164 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 OR6B3Q8NGW1 331 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 MAGEC3Q8TD91 643 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 C2orf48Q96LS8 159 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 ZNF582Q96NG8 517 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 SYT17Q9BSW7 474 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 LMF2Q9BU23 707 aaKnown RBP-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 HES7Q9BYE0 225 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 PANK2Q9BZ23 570 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 SLC39A8Q9C0K1 460 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 ERAP1Q9NZ08 941 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 IL17CQ9P0M4 197 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 PADI1Q9ULC6 663 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 MAPRE3Q9UPY8 281 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 HPSEQ9Y251 543 aa-0.41□□□□□ -2.48
TRAJ53-201ENST00000390485 IGHV4-4A0A075B6R2 117 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 A0A1W2PQ72 361 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TCRBV7S3A2A0A539 114 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 DDTLA6NHG4 134 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 DUXAA6NLW8 204 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 SERPINE3A8MV23 424 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TBX3O15119 743 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PLRG1O43660 514 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PCDHGA12O60330 932 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 AP2A2O94973 939 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 IGHV4-38-2P0DP08 117 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TPH1P17752 444 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 YY1P25490 414 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 GNL1P36915 607 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PTGDSP41222 190 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 HALP42357 657 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 MAPK9P45984 424 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 NR2C2P49116 596 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 KCNJ10P78508 379 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 DRP2Q13474 957 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 GTF2H2Q13888 395 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 SLC29A2Q14542 456 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 CNN3Q15417 329 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 INAVAQ3KP66 663 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 FAM171A1Q5VUB5 890 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PLAG1Q6DJT9 500 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 GTF2H2CQ6P1K8 395 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 WDR73Q6P4I2 378 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TLDC1Q6P9B6 456 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TMEM88Q6PEY1 159 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PIK3AP1Q6ZUJ8 805 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 ANO5Q75V66 913 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TMC8Q8IU68 726 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 TMTC1Q8IUR5 882 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 DENND6AQ8IWF6 608 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 CHERPQ8IWX8 916 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 CCDC105Q8IYK2 499 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 RNF113BQ8IZP6 322 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 ABHD12Q8N2K0 398 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 Q8NBF4 154 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 FAM110DQ8TAY7 271 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 SMCR8Q8TEV9 937 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PARD3BQ8TEW8 1205 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 STARD4Q96DR4 205 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PDLIM5Q96HC4 596 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PRICKLE1Q96MT3 831 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 KRT12Q99456 494 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 MYNNQ9NPC7 610 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 HERC5Q9UII4 1024 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 MMACHCQ9Y4U1 282 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PCDHGA9Q9Y5G4 932 aaKnown RBP-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PCDHGA8Q9Y5G5 932 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PCDHGA7Q9Y5G6 932 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PCDHGA6Q9Y5G7 932 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 PCDHGA3Q9Y5H0 932 aa-0.42□□□□□ -2.48
TRAJ53-201ENST00000390485 CDC42BPBQ9Y5S2 1711 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms