RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 AZGP1P25311 298 aaKnown RBP16.35■□□□□ 0.21
GPC1-201ENST00000264039 OXTRP30559 389 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 BAG6P46379 1132 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 RAB15P59190 212 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 RBBP7Q16576 425 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 AGAP9Q5VTM2 703 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 THAP5Q7Z6K1 395 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 MILR1Q7Z6M3 343 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 ZNF567Q8N184 647 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 MOCS1Q9NZB8 636 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 COQ3Q9NZJ6 369 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 SUCOQ9UBS9 1254 aaKnown RBP16.35■□□□□ 0.21
GPC1-201ENST00000264039 TIMM22Q9Y584 194 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 PCDHGA7Q9Y5G6 932 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 UBIAD1Q9Y5Z9 338 aa16.35■□□□□ 0.21
GPC1-201ENST00000264039 SUPT3HB4E1H0 165 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 GUCY1B2O75343 617 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 TPSB2P20231 275 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 GJA9P57773 515 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CDK18Q07002 472 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 TPSAB1Q15661 275 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 NDUFA5Q16718 116 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 PFKFB4Q16877 469 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 GJC2Q5T442 439 aaPredicted RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 PPP4R4Q6NUP7 873 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 NEK5Q6P3R8 708 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 LZTR1Q8N653 840 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 NIPA2Q8N8Q9 360 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 SGCDQ92629 289 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 FUNDC2Q9BWH2 189 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 BEX2Q9BXY8 128 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 SMURF2Q9HAU4 748 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 RPRD1BQ9NQG5 326 aaKnown RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 ERVK-11Q9UQG0 969 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 YDJCA8MPS7 323 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 GRID2O43424 1007 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 PAMP19021 973 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 HADHAP40939 763 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 LAPTM4AQ15012 233 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 ZYG11AQ6WRX3 759 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CATSPER4Q7RTX7 472 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 PIWIL4Q7Z3Z4 852 aaKnown RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 LRCH3Q96II8 777 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CDHR1Q96JP9 859 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 NODALQ96S42 347 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 ZNF347Q96SE7 839 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 MORF4L1Q9UBU8 362 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 EVLQ9UI08 416 aaPredicted RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 TBC1D30Q9Y2I9 924 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 ZSCAN5BA6NJL1 495 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 FAM47E-STBD1D6RA91 191 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 ENTPD3O75355 529 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CDH1P12830 882 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 IDUAP35475 653 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CAP2P40123 477 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 ST13P50502 369 aaKnown RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 LIPEQ05469 1076 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CAPSQ13938 189 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 DMC1Q14565 340 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 TRIP4Q15650 581 aaPredicted RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 ATP6AP1LQ52LC2 224 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 ARMC4Q5T2S8 1044 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 PPP1R26Q5T8A7 1209 aaPredicted RBP16.34■□□□□ 0.21
GPC1-201ENST00000264039 DEPDC1Q5TB30 811 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 RAP1GAP2Q684P5 730 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 DEFB106AQ8N104 65 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 FICDQ9BVA6 458 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 NEK6Q9HC98 313 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 KLQ9UEF7 1012 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 PDE10AQ9Y233 779 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 CITO14578 2027 aa16.34■□□□□ 0.21
GPC1-201ENST00000264039 NDUFS2O75306 463 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 CLK3P49761 638 aaKnown RBP16.33■□□□□ 0.21
GPC1-201ENST00000264039 TAS2R39P59534 338 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 SLC6A3Q01959 620 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 TNFAIP2Q03169 654 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 TMEM132DQ14C87 1099 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 ATAD3BQ5T9A4 648 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 P3H2Q8IVL5 708 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 ZNF420Q8TAQ5 688 aaPredicted RBP16.33■□□□□ 0.21
GPC1-201ENST00000264039 IRF2BPLQ9H1B7 796 aa16.33■□□□□ 0.21
GPC1-201ENST00000264039 ARPC2O15144 300 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 PGLSO95336 258 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 ATP5F1P24539 256 aaPredicted RBP16.33■□□□□ 0.2
GPC1-201ENST00000264039 FMO3P31513 532 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 CCNA1P78396 465 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 SPCS2Q15005 226 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 CNSTQ6PJW8 725 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 ZNF540Q8NDQ6 660 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 PPHLN1Q8NEY8 458 aaKnown RBP16.33■□□□□ 0.2
GPC1-201ENST00000264039 RNF139Q8WU17 664 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 HEXDCQ8WVB3 486 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 PABPC5Q96DU9 382 aaKnown RBP16.33■□□□□ 0.2
GPC1-201ENST00000264039 CLIP3Q96DZ5 547 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 TBCBQ99426 244 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 DCCP43146 1447 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms