RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Afg1lQ3V384 480 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Spata7Q80VP2 582 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ccdc116Q80X53 541 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pcdhb7Q8CDY9 829 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Eif2b5Q8CHW4 717 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 HnmtQ91VF2 295 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 GsdmcQ99NB5 468 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dus2Q9D7B1 493 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tle2Q9WVB2 767 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Wdr46Q9Z0H1 622 aaKnown RBP12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kif26aQ52KG5 1881 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tnip3A0A1D5RMN0 279 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyp2b23E9Q593 491 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm8334F7CD45 553 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Kcnc1P15388 511 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Casp2P29594 452 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Prim2P33610 505 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rab17P35292 214 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mxd1P50538 227 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 DsppP97399 934 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Colec11Q3SXB8 272 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fam131bQ3TY60 332 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fam189bQ5HZJ5 669 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 GpamQ61586 827 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mppe1Q80XL7 396 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Noc4lQ8BHY2 516 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 DseQ8BLI4 958 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Psapl1Q8C1C1 522 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cabcoco1Q8CDT7 208 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Syn3Q8JZP2 579 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ipo13Q8K0C1 963 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Usp45Q8K387 813 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr847Q8VFF4 312 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 PclafQ9CQX4 110 aaKnown RBP12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fam136aQ9CR98 138 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Prpsap1Q9D0M1 356 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Atad1Q9D5T0 361 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ndst3Q9EQH7 873 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyhr1Q9QXA1 311 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Med20Q9R0X0 212 aa12.77□□□□□ -0.37
Rnf4-201ENSMUST00000030992 BC049352E9Q2Z6 85 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Vmn2r46L7N282 809 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Hmga1P17095 107 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rpl5P47962 297 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ldb1P70662 411 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 NxnP97346 435 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ptpn14Q62130 1189 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cox8aQ64445 69 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fnip1Q68FD7 1165 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cpa4Q6P8K8 420 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rps27lQ6ZWY3 84 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Dhx33Q80VY9 698 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fndc11Q80WB0 326 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Hacd3Q8K2C9 362 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 RhoqQ8R527 205 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pip4k2cQ91XU3 421 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tnfaip8l2Q9D8Y7 184 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Isca2Q9DCB8 154 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Chrna6Q9R0W9 494 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nup205A0A0J9YUD5 2061 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Foxm1O08696 760 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Atn1O35126 1175 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Kifc3O35231 824 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyp2b19O55071 492 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Polr3bP59470 1133 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rbp1Q00915 135 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 ItkQ03526 625 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gpatch4Q3TFK5 415 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rsrp1Q3UC65 298 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Akap14Q3V0I7 536 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mocs1Q5RKZ7 636 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ccdc85aQ5SP85 500 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Adora2aQ60613 410 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Tdpoz3Q717B4 365 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Itpk1Q8BYN3 419 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Samd3Q8C4H2 520 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sirt3Q8R104 334 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sgsm3Q8VCZ6 750 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Smim11aQ99J19 55 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Alg13Q9D8C3 1166 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Maged2Q9ER67 616 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mpp6Q9JLB0 553 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cdh17Q9R100 827 aa12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ddx39bQ9Z1N5 428 aaKnown RBP12.76□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm6509A0A0J9YUV1 481 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rpl9-ps6A0A140T8T4 192 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Galntl6E5D8G1 601 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Gm6351K9J7D1 481 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Man1a1P45700 655 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sipa1P46062 1037 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Rpl9P51410 192 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 YwhaqP68254 245 aaKnown RBP12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cd300lgQ1ERP8 331 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Serac1Q3U213 654 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Hipk4Q3V016 616 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Slc6a4Q60857 630 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr667Q7TRP4 326 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pqlc1Q80XM9 271 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Lyve1Q8BHC0 318 aa12.75□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Sfrp1Q8C4U3 314 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms