RNA–Protein interactions for RNA: ENST00000635030.1

SMARCA2-233, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 4

Gene SMARCA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-233	ENST00000635030	TDRD5	Q8NAT2	981 aa	Known RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PIK3C3	Q8NEB9	887 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ST13P5	Q8NFI4	369 aa	Predicted RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	OR5H6	Q8NGV6	325 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MCOLN3	Q8TDD5	553 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	BLOC1S5	Q8TDH9	187 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	KLHL6	Q8WZ60	621 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	FIG4	Q92562	907 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SLC9A6	Q92581	669 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	STAM	Q92783	540 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TOP1MT	Q969P6	601 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SH3KBP1	Q96B97	665 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MCRS1	Q96EZ8	462 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	EDC3	Q96F86	508 aa	Known RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CDCA5	Q96FF9	252 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TMEM80	Q96HE8	168 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SH3YL1	Q96HL8	342 aa	Predicted RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CLPTM1L	Q96KA5	538 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	NAP1L4	Q99733	375 aa	Known RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SLC29A1	Q99808	456 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	GAL3ST1	Q99999	423 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ZSWIM1	Q9BR11	485 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TMEM246	Q9BRR3	403 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MXD3	Q9BW11	206 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	KIFC1	Q9BW19	673 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PACSIN1	Q9BY11	444 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MTMR12	Q9C0I1	747 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SMYD3	Q9H7B4	428 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ERVMER34-1	Q9H9K5	563 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	EFCAB1	Q9HAE3	211 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	KCNK13	Q9HB14	408 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	LY9	Q9HBG7	655 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CD320	Q9NPF0	282 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	FBXO8	Q9NRD0	319 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	GPR160	Q9UJ42	338 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CPSF3	Q9UKF6	684 aa	Known RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	KCNJ14	Q9UNX9	436 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	GRIP1	Q9Y3R0	1128 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PCDHB14	Q9Y5E9	798 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	KCNE2	Q9Y6J6	123 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PRR36	Q9H6K5	1346 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SCN11A	Q9UI33	1791 aa		5.36	□□□□□ -1.55
SMARCA2-233	ENST00000635030	LOXHD1	Q8IVV2	1947 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	AKAP11	Q9UKA4	1901 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SIGLEC1	Q9BZZ2	1709 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MROH5	Q6ZUA9	1318 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	IGSF1	Q8N6C5	1336 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030		A0A1W2PRG6	482 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SHISA3	A0PJX4	238 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	GTPBP10	A4D1E9	387 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TCAF2	A6NFQ2	919 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PCP4L1	A6NKN8	68 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	C12orf71	A8MTZ7	269 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	NPIPB6	E9PJ23	425 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030		H3BMM5	538 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PLK4	O00444	970 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	BTN3A1	O00481	513 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TOR1A	O14656	332 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	HDAC3	O15379	428 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	GATC	O43716	136 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	NOL4	O94818	638 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MFN2	O95140	757 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CPNE6	O95741	557 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	NDST3	O95803	873 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	WDPCP	O95876	746 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CALB1	P05937	261 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	IFIT1	P09914	478 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	DBT	P11182	482 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ITGA2	P17301	1181 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ATF7	P17544	494 aa	Predicted RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	MYF6	P23409	242 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CALML3	P27482	149 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CCND2	P30279	289 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	AXL	P30530	894 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	DDOST	P39656	456 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ABCG1	P45844	678 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	NR2C2	P49116	596 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ITGA8	P53708	1063 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	NME5	P56597	212 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	FKBP3	Q00688	224 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	OTUD4	Q01804	1114 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	REL	Q04864	619 aa	Predicted RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	PPAT	Q06203	517 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	ENPEP	Q07075	957 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	OVGP1	Q12889	678 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	BNIP2	Q12982	314 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	DUSP4	Q13115	394 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TCIRG1	Q13488	830 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	SLC12A1	Q13621	1099 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	CTTN	Q14247	550 aa	Known RBP	5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	FLOT2	Q14254	428 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	KCTD2	Q14681	263 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	RAB39A	Q14964	217 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	DGUOK	Q16854	277 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	TBRG1	Q3YBR2	411 aa		5.35	□□□□□ -1.55
SMARCA2-233	ENST00000635030	FBLN7	Q53RD9	439 aa		5.35	□□□□□ -1.55

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