RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 DHRS13Q6UX07 377 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 ZNF793Q6ZN11 406 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 TRABD2AQ86V40 505 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 CERS3Q8IU89 383 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 FBXO16Q8IX29 292 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-207ENST00000536634 FAM133AQ8N9E0 248 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 TP63Q9H3D4 680 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-207ENST00000536634 RAVER2Q9HCJ3 691 aaKnown RBP5.91□□□□□ -1.46
CLIP1-207ENST00000536634 GPR108Q9NPR9 543 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 SWAP70Q9UH65 585 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 MUTYHQ9UIF7 546 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 TNNQ9UQP3 1299 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-207ENST00000536634 CEP250Q9BV73 2442 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 MYH4Q9Y623 1939 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 CHD8Q9HCK8 2581 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 ABHD14A-ACY1A0A1B0GW23 586 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 LINC01553A4QN01 128 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 GOLGA6L3A6NEY3 463 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 KIF28PB7ZC32 967 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 SOCS2O14508 198 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 ATP2A1O14983 1001 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 NKX2-8O15522 239 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 PPP6R2O75170 966 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 NDUFB10O96000 172 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 ENO1P06733 434 aaKnown RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 ACTN1P12814 892 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 PDIA3P30101 505 aaKnown RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 SLC37A1P57057 533 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 TAS2R50P59544 299 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 SRSF1Q07955 248 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 GALNT1Q10472 559 aaPredicted RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 BTBD16Q32M84 506 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 FAM57BQ71RH2 274 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 MRPL10Q7Z7H8 261 aaKnown RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 GATAD2AQ86YP4 633 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 UEVLDQ8IX04 471 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 ZNF527Q8NB42 609 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 FAM71BQ8TC56 605 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 PMM1Q92871 262 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 FAR2Q96K12 515 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 CRB3Q9BUF7 120 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 MECRQ9BV79 373 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 CRNKL1Q9BZJ0 848 aaKnown RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 API5Q9BZZ5 524 aaKnown RBP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 TRIM2Q9C040 744 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 FTOQ9C0B1 505 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLIP1-207ENST00000536634 SLC38A10Q9HBR0 1119 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 TMEM45AQ9NWC5 275 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 RAB21Q9UL25 225 aa5.9□□□□□ -1.46
CLIP1-207ENST00000536634 MICAL3Q7RTP6 2002 aa5.9□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF532Q9HCE3 1301 aa5.9□□□□□ -1.47
CLIP1-207ENST00000536634 BAHCC1Q9P281 2608 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 COL4A6Q14031 1691 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 BAIAP3O94812 1187 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 GJB5O95377 273 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 IGKV2-30P06310 120 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 RFC2P35250 354 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 SLC12A2P55011 1212 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 FOXL2P58012 376 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 RPL15P61313 204 aaKnown RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 OS9Q13438 667 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 HDAC1Q13547 482 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 PGM5Q15124 567 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 ANXA2RQ3ZCQ2 193 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 C12orf60Q5U649 245 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 WDR93Q6P2C0 686 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF474Q6S9Z5 364 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 IRF2BP2Q7Z5L9 587 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 ADHFE1Q8IWW8 467 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 NRSN1Q8IZ57 195 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 FAM9BQ8IZU0 186 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 ARL14EPQ8N8R7 260 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF548Q8NEK5 533 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 WDR60Q8WVS4 1066 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 TGS1Q96RS0 853 aaKnown RBP5.89□□□□□ -1.47
CLIP1-207ENST00000536634 CTAGE1Q96RT6 745 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 SEZ6LQ9BYH1 1024 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 PRDM16Q9HAZ2 1276 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 LRCH1Q9Y2L9 728 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 EMSYQ7Z589 1322 aa5.89□□□□□ -1.47
CLIP1-207ENST00000536634 NLRC5Q86WI3 1866 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 F5H6K3 240 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 UGDHO60701 494 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 NBNO60934 754 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 ZBED4O75132 1171 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 CNTN5O94779 1100 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 SUPT20HL2P0C7V6 817 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 TFEBP19484 476 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 SHC2P98077 582 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 KLRC3Q07444 240 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 PFKFB4Q16877 469 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 GLE1Q53GS7 698 aaKnown RBP5.88□□□□□ -1.47
CLIP1-207ENST00000536634 HERC4Q5GLZ8 1057 aaPredicted RBP5.88□□□□□ -1.47
CLIP1-207ENST00000536634 TCEAL5Q5H9L2 206 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 SLC9C2Q5TAH2 1124 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 ADGRF3Q8IZF5 1079 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 BCAS4Q8TDM0 211 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms