RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 Q6ZSR6 202 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 DPPA4Q7L190 304 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
CLCN3-210ENST00000515420 ZSWIM9Q86XI8 627 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 RHBDD1Q8TEB9 315 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 CAMK1GQ96NX5 476 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 MYOCQ99972 504 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 MAK16Q9BXY0 300 aaKnown RBP12.87□□□□□ -0.35
CLCN3-210ENST00000515420 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLCN3-210ENST00000515420 SPTY2D1-AS1A0A0U1RR47 76 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 POM121BA6NF01 834 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 RAD51BO15315 384 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 PJA2O43164 708 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 MMP20O60882 483 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 NEBLO76041 1014 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 ITGAVP06756 1048 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 C6P13671 934 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 CCNB1P14635 433 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 CDKN2BP42772 138 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 NR2C2P49116 596 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 VAV2P52735 878 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 CLDN2P57739 230 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 FAM193AP78312 1265 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 SLC10A2Q12908 348 aaPredicted RBP12.86□□□□□ -0.35
CLCN3-210ENST00000515420 TFDP2Q14188 446 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 PTK2BQ14289 1009 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 PDK1Q15118 436 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
CLCN3-210ENST00000515420 KANSL1Q7Z3B3 1105 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 DAAM2Q86T65 1068 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 PARGQ86W56 976 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 TMEM139Q8IV31 216 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 CCDC13Q8IYE1 715 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 KATNAL2Q8IYT4 538 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 TP53I13Q8NBR0 393 aaPredicted RBP12.86□□□□□ -0.35
CLCN3-210ENST00000515420 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 NOD2Q9HC29 1040 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 KCTD5Q9NXV2 234 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 PHTF1Q9UMS5 762 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 WASF3Q9UPY6 502 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 APOBEC2Q9Y235 224 aaKnown RBP12.86□□□□□ -0.35
CLCN3-210ENST00000515420 BTBD3Q9Y2F9 522 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
CLCN3-210ENST00000515420 SPAARA0A1B0GVQ0 90 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 TNFSF14O43557 240 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 DKK1O94907 266 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 CPP00450 1065 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 KRT10P13645 584 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 CA4P22748 312 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 IGFALSP35858 605 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 LIG3P49916 1009 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 MAXP61244 160 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 IFI35P80217 286 aaPredicted RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 IL9RQ01113 521 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 RALGDSQ12967 914 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 LRRC14Q15048 493 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 TFDP3Q5H9I0 405 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 LIPIQ6XZB0 460 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 RFX6Q8HWS3 928 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 RCOR2Q8IZ40 523 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 PAF1Q8N7H5 531 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 EXD1Q8NHP7 514 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 RBM41Q96IZ5 413 aaKnown RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 MCCC1Q96RQ3 725 aaPredicted RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 IL12RB2Q99665 862 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 SEMA3CQ99985 751 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 WRAP53Q9BUR4 548 aaKnown RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 RBM22Q9NW64 420 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 REXO2Q9Y3B8 237 aaKnown RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 HYOU1Q9Y4L1 999 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 PCDHGC4Q9Y5F7 938 aa12.85□□□□□ -0.35
CLCN3-210ENST00000515420 TDRD6O60522 2096 aaKnown RBP12.85□□□□□ -0.35
CLCN3-210ENST00000515420 RCCD1A6NED2 376 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 PSMD11O00231 422 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 FZD6O60353 706 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 PGLSO95336 258 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 MAP3K6O95382 1288 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 CSF2P04141 144 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 FTH1P19P0C7X4 201 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 CYP2A6P11509 494 aaPredicted RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 NME1P15531 152 aaKnown RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 ITIH2P19823 946 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 TGM2P21980 687 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 CTNNA1P35221 906 aaKnown RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 PEX5P50542 639 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 GSDMDP57764 484 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 COPS2P61201 443 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms