RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 THBS1P07996 1170 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 KRT3P12035 628 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 NME1P15531 152 aaKnown RBP15.33■□□□□ 0.04
TNRC18-210ENST00000497663 TGM2P21980 687 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 MAPKAPK2P49137 400 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 NCAPHQ15003 741 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 POLD3Q15054 466 aaPredicted RBP15.33■□□□□ 0.04
TNRC18-210ENST00000497663 CYTH1Q15438 398 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 ZNF805Q5CZA5 627 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 PERM1Q5SV97 790 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 PCSK4Q6UW60 755 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.04
TNRC18-210ENST00000497663 MON1BQ7L1V2 547 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 STRADAQ7RTN6 431 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 PHF13Q86YI8 300 aaPredicted RBP15.33■□□□□ 0.04
TNRC18-210ENST00000497663 ISG20Q96AZ6 181 aaKnown RBP15.33■□□□□ 0.04
TNRC18-210ENST00000497663 NAF1Q96HR8 494 aaKnown RBP15.33■□□□□ 0.04
TNRC18-210ENST00000497663 PPP1R16AQ96I34 528 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 NSMCE3Q96MG7 304 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 NLGN3Q9NZ94 848 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 LHX3Q9UBR4 397 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 COQ6Q9Y2Z9 468 aa15.33■□□□□ 0.04
TNRC18-210ENST00000497663 ATMQ13315 3056 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 BUB1O43683 1085 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 GSRP00390 522 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 CDK4P11802 303 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 GPD1P21695 349 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 STAT1P42224 750 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 CA9Q16790 459 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 SCYL2Q6P3W7 929 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 LRRC69Q6ZNQ3 347 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 VPS36Q86VN1 386 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 ZSWIM9Q86XI8 627 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 ARFGAP1Q8N6T3 406 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 RTL3Q8N8U3 475 aaKnown RBP15.32■□□□□ 0.04
TNRC18-210ENST00000497663 MSANTD4Q8NCY6 345 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 IFI44Q8TCB0 444 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 LMX1AQ8TE12 382 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 LENG8Q96PV6 779 aaPredicted RBP15.32■□□□□ 0.04
TNRC18-210ENST00000497663 WRAP53Q9BUR4 548 aaKnown RBP15.32■□□□□ 0.04
TNRC18-210ENST00000497663 CLPBQ9H078 707 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 MAGEH1Q9H213 219 aa15.32■□□□□ 0.04
TNRC18-210ENST00000497663 LIMA1Q9UHB6 759 aaKnown RBP15.32■□□□□ 0.04
TNRC18-210ENST00000497663 CPED1A4D0V7 1026 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 RASA4BC9J798 803 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 J3KR12 359 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 RASA4O43374 803 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 CREB3O43889 395 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 CSO75390 466 aaKnown RBP15.31■□□□□ 0.04
TNRC18-210ENST00000497663 ATP1A3P13637 1013 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 RGRP47804 291 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
TNRC18-210ENST00000497663 E2F1Q01094 437 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 TLE3Q04726 772 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 TBC1D25Q3MII6 688 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 ARL13BQ3SXY8 428 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
TNRC18-210ENST00000497663 GDPD4Q6W3E5 623 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 SLFN11Q7Z7L1 901 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 PARGQ86W56 976 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 SPACA3Q8IXA5 215 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 TP53INP2Q8IXH6 220 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 CACTIN-AS1Q8N1I8 211 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 FAM181AQ8N9Y4 354 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 TP53I13Q8NBR0 393 aaPredicted RBP15.31■□□□□ 0.04
TNRC18-210ENST00000497663 FGF11Q92914 225 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 NTAN1Q96AB6 310 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 MCEEQ96PE7 176 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 AGPAT1Q99943 283 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 SELENOOQ9BVL4 669 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 TRIM7Q9C029 511 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 ZCCHC2Q9C0B9 1178 aaKnown RBP15.31■□□□□ 0.04
TNRC18-210ENST00000497663 SEPT11Q9NVA2 429 aaKnown RBP15.31■□□□□ 0.04
TNRC18-210ENST00000497663 FZD10Q9ULW2 581 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 RP1P56715 2156 aa15.31■□□□□ 0.04
TNRC18-210ENST00000497663 SIGLEC16A6NMB1 481 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 LGALS16A8MUM7 142 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 NEMP1O14524 444 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 FPGTO14772 594 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 TEX33O43247 280 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 AQP9O43315 295 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 TSPAN6O43657 245 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 BUB1BO60566 1050 aaPredicted RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 USP12O75317 370 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 POP4O95707 220 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 EPHB2P29323 1055 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 NSFP46459 744 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 RABIFP47224 123 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 ADKP55263 362 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 SGCGQ13326 291 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 CT47A1Q5JQC4 288 aaPredicted RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 ARHGAP36Q6ZRI8 547 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 CLEC17AQ6ZS10 378 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 TTC7BQ86TV6 843 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 ZNF354CQ86Y25 554 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 SFTPA2Q8IWL1 248 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 C3orf20Q8ND61 904 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms