RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 FBRSL1Q9HCM7 1045 aaKnown RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 SLC6A13Q9NSD5 602 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 SPATS2LQ9NUQ6 558 aaKnown RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CLIC5Q9NZA1 410 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 MSRB1Q9NZV6 116 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 FHOD3Q2V2M9 1422 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 MYO5CQ9NQX4 1742 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 UHRF1BP1Q6BDS2 1440 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 A0A1W2PQF6 199 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 HSPB2A8KAH6 182 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 MYO1GB0I1T2 1018 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 KLRF2D3W0D1 207 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 E5RJQ4 531 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 BCAT2O15382 392 aaPredicted RBP5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 ATP2C2O75185 946 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 MT-CYBP00156 380 aaPredicted RBP5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 SRD5A1P18405 259 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 ITGAXP20702 1163 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 ACTN2P35609 894 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 GABRB2P47870 512 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 CXCR3P49682 368 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 NLRP5P59047 1200 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 CAPSQ13938 189 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 FGFBP1Q14512 234 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 HSPB2Q16082 182 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 COL28A1Q2UY09 1125 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 PLEKHO1Q53GL0 409 aaPredicted RBP5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 GSTA5Q7RTV2 222 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 ANKRD13BQ86YJ7 626 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 RPAP2Q8IXW5 612 aaPredicted RBP5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 MCPH1Q8NEM0 835 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 NEK9Q8TD19 979 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 ZG16BQ96DA0 208 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 CMTM3Q96MX0 182 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 SIN3AQ96ST3 1273 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 LHPPQ9H008 270 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 TMPRSS5Q9H3S3 457 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 KAT14Q9H8E8 782 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 KIF9Q9HAQ2 790 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 PLK2Q9NYY3 685 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 LSM4Q9Y4Z0 139 aaKnown RBP5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 MAGI2Q86UL8 1455 aa5.18□□□□□ -1.58
PRPF38A-203ENST00000487160 PTPRTO14522 1441 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 hCG_1807616A0A1W2PRN6 198 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 AGAP14A8MT82 685 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ZNF814B7Z6K7 855 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 STMND1H3BQB6 276 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 SEC14L5O43304 696 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 TIMM44O43615 452 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 TLX3O43711 291 aaPredicted RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 GJB3O75712 270 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 CLDN7O95471 211 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 PCNAP12004 261 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 PORP16435 677 aaPredicted RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 CDH2P19022 906 aaPredicted RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 RAD52P43351 418 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 NUCB1Q02818 461 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 CSTF3Q12996 717 aaKnown RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 WTAPQ15007 396 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 Q4G0T1 1027 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 DUSP28Q4G0W2 176 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 SZRD1Q7Z422 152 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 NOXA1Q86UR1 476 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ARHGAP12Q8IWW6 846 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ZCCHC9Q8N567 271 aaKnown RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 GJC3Q8NFK1 279 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 MMABQ96EY8 250 aaPredicted RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ZC3HAV1LQ96H79 300 aaKnown RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ZNF333Q96JL9 665 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 MXRA8Q9BRK3 442 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 CDT1Q9H211 546 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ASAH2Q9NR71 780 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 DLGAP2Q9P1A6 1054 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 NDRG3Q9UGV2 375 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 COG5Q9UP83 839 aa5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 NUP153P49790 1475 aaKnown RBP5.17□□□□□ -1.58
PRPF38A-203ENST00000487160 C9orf84Q5VXU9 1444 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 ZNF142P52746 1687 aaPredicted RBP5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 FRMD3A2A2Y4 597 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 ATG13O75143 517 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 CNOT3O75175 753 aaKnown RBP5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 CELA2AP08217 269 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 ENO3P13929 434 aaPredicted RBP5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 CDAP32320 146 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 GARSP41250 739 aaKnown RBP5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 PPP3CCP48454 512 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 HMGA2P52926 109 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 MTX1Q13505 466 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 ACVR2BQ13705 512 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 LPIN1Q14693 890 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 CRYMQ14894 314 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 PRAMEF19Q5SWL8 479 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 HEPHL1Q6MZM0 1159 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 ENOSF1Q7L5Y1 443 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 RBFAQ8N0V3 343 aa5.16□□□□□ -1.58
PRPF38A-203ENST00000487160 SRBD1Q8N5C6 995 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms