RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 HNRNPDLO14979 420 aaKnown RBP21.36■■□□□ 1.01
SDF4-206ENST00000478938 ALBP02768 609 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 GLULP15104 373 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 NPTX2P47972 431 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 PGGT1BP53609 377 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 FAM214AQ32MH5 1076 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 OTUD3Q5T2D3 398 aaPredicted RBP21.36■■□□□ 1.01
SDF4-206ENST00000478938 RHOXF1Q8NHV9 184 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 STMN3Q9NZ72 180 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 USP18Q9UMW8 372 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 TRUB2O95900 331 aaKnown RBP21.36■■□□□ 1.01
SDF4-206ENST00000478938 SOX10P56693 466 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 PRPSAP1Q14558 356 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 POU6F1Q14863 301 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 PTPN20Q4JDL3 420 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 CYP20A1Q6UW02 462 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 SLC51BQ86UW2 128 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 ADGRG5Q8IZF4 528 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 PLD5Q8N7P1 536 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 FLAD1Q8NFF5 587 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 OR9I1Q8NGQ6 314 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 JPH3Q8WXH2 748 aaPredicted RBP21.36■■□□□ 1.01
SDF4-206ENST00000478938 RMDN1Q96DB5 314 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 DSN1Q9H410 356 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 DDX4Q9NQI0 724 aaKnown RBP21.36■■□□□ 1.01
SDF4-206ENST00000478938 VTI1BQ9UEU0 232 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 EVPLLA8MZ36 301 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 HMGCRP04035 888 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 CYP2C18P33260 490 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 SKIV2LQ15477 1246 aaKnown RBP21.35■■□□□ 1.01
SDF4-206ENST00000478938 SH3PXD2AQ5TCZ1 1133 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 RASSF5Q8WWW0 418 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 LTB4R2Q9NPC1 389 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 hCG_2039718K7EN88 272 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 MTSS1O43312 755 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 H2AFYO75367 372 aaKnown RBP21.35■■□□□ 1.01
SDF4-206ENST00000478938 NTRK1P04629 796 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 ETV3P41162 512 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 SERPINB10P48595 397 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 ZFP69Q49AA0 526 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 OR13J1Q8NGT2 312 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 BRSK1Q8TDC3 778 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 CPB2Q96IY4 423 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 PAQR5Q9NXK6 330 aaPredicted RBP21.35■■□□□ 1.01
SDF4-206ENST00000478938 DSEQ9UL01 958 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 CNTN6Q9UQ52 1028 aa21.35■■□□□ 1.01
SDF4-206ENST00000478938 ZW10O43264 779 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 LSM8O95777 96 aaKnown RBP21.34■■□□□ 1.01
SDF4-206ENST00000478938 MGAT1P26572 445 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 SOX11P35716 441 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 GTF2A2P52657 109 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 SUZ12Q15022 739 aaKnown RBP21.34■■□□□ 1.01
SDF4-206ENST00000478938 AGAP6Q5VW22 663 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 B3GNT9Q6UX72 402 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 CCBE1Q6UXH8 406 aaPredicted RBP21.34■■□□□ 1.01
SDF4-206ENST00000478938 LINC00299Q6ZSB3 139 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 FAM35AQ86V20 835 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 PELI3Q8N2H9 469 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 TP53I13Q8NBR0 393 aaPredicted RBP21.34■■□□□ 1.01
SDF4-206ENST00000478938 PSD4Q8NDX1 1056 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 MYRFLQ96LU7 910 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 AGAP4Q96P64 663 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 TTYH2Q9BSA4 534 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 ACE2Q9BYF1 805 aaPredicted RBP21.34■■□□□ 1.01
SDF4-206ENST00000478938 SCN4AP35499 1836 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 NME4O00746 187 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 TSPAN9O75954 239 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 GP5P40197 560 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 GARSP41250 739 aaKnown RBP21.34■■□□□ 1.01
SDF4-206ENST00000478938 ZNF132P52740 706 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 NAB1Q13506 487 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 COLEC12Q5KU26 742 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 FAM219BQ5XKK7 198 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 SIMC1Q8NDZ2 872 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 BSNDQ8WZ55 320 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 TFAP2BQ92481 460 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 VPS33BQ9H267 617 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 C12orf10Q9HB07 376 aa21.34■■□□□ 1.01
SDF4-206ENST00000478938 A0A0G2JMP0 313 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 ISPDA4D126 451 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 NDUFS2O75306 463 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 MTRF1O75570 445 aaKnown RBP21.33■■□□□ 1.01
SDF4-206ENST00000478938 GABARAPO95166 117 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 GTF2E2P29084 291 aaKnown RBP21.33■■□□□ 1.01
SDF4-206ENST00000478938 GLRBP48167 497 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 CTAG1AP78358 180 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 CBX2Q14781 532 aaPredicted RBP21.33■■□□□ 1.01
SDF4-206ENST00000478938 SNX17Q15036 470 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 LIPMQ5VYY2 423 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 CYS1Q717R9 158 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 SDCCAG3Q96C92 435 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 MFSD3Q96ES6 412 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 GPATCH2LQ9NWQ4 482 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 GMIPQ9P107 970 aa21.33■■□□□ 1.01
SDF4-206ENST00000478938 B8ZZF3 427 aa21.33■■□□□ 1
SDF4-206ENST00000478938 SNRPB2P08579 225 aaKnown RBP21.33■■□□□ 1
SDF4-206ENST00000478938 FMO4P31512 558 aa21.33■■□□□ 1
SDF4-206ENST00000478938 TFDP2Q14188 446 aa21.33■■□□□ 1
SDF4-206ENST00000478938 DENND1BQ6P3S1 775 aa21.33■■□□□ 1
SDF4-206ENST00000478938 LEMD2Q8NC56 503 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms