RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 C2orf40Q9H1Z8 148 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 CASS4Q9NQ75 786 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 PDGFCQ9NRA1 345 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 UTP6Q9NYH9 597 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 TMEM181Q9P2C4 612 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SLC2A6Q9UGQ3 507 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ACOT9Q9Y305 439 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 C1orf232A0A0U1RR37 186 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 TMEM88BA6NKF7 163 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 NME4O00746 187 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 EI24O14681 340 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 MTHFD1P11586 935 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ADSLP30566 484 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 CSE1LP55060 971 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 RBP5P82980 135 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 STX5Q13190 355 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SLC12A1Q13621 1099 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 POU6F1Q14863 301 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 NR1D2Q14995 579 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SLC26A9Q7LBE3 791 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 IFNEQ86WN2 208 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SLC15A3Q8IY34 581 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 OR2T34Q8NGX1 318 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 OR2T3Q8NH03 318 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SPATA22Q8NHS9 363 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 DQX1Q8TE96 717 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 NRP2O60462 931 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 AOC2O75106 756 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 GPC4O75487 556 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 MYF6P23409 242 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 HOXD12P35452 270 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 APLP1P51693 650 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 HTRA3P83110 453 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 CSHL1Q14406 222 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 GALNT18Q6P9A2 607 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 FUNDC1Q8IVP5 155 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ANKRD52Q8NB46 1076 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 C3orf30Q96M34 536 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 CDH7Q9ULB5 785 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 MANSC4A6NHS7 340 aaPredicted RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF487B1APH4 448 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 EEF2KO00418 725 aaKnown RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 CLOCKO15516 846 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 TOMM70O94826 608 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 BMP2P12643 396 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ERCC2P18074 760 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 CSRP3P50461 194 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 TAS2R39P59534 338 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 LAMC2Q13753 1193 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 PDCD4Q53EL6 469 aaKnown RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 HFE2Q6ZVN8 426 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ACDQ96AP0 544 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ZMAT2Q96NC0 199 aaKnown RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 SETD4Q9NVD3 440 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 FAM95CA0A1B0GW59 222 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 M0QYT0 321 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 SNAP29O95721 258 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 NCK1P16333 377 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 CYP2B6P20813 491 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 CES1P23141 567 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ELK4P28324 431 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 PSMD8P48556 350 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF789Q5FWF6 425 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 GJC2Q5T442 439 aaPredicted RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 KCTD11Q693B1 232 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 CYHR1Q6ZMK1 362 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 RSPH1Q8WYR4 309 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 CELF6Q96J87 481 aaKnown RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ELMO2Q96JJ3 720 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 EFHD1Q9BUP0 239 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 RHOJQ9H4E5 214 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ZFYVE28Q9HCC9 887 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 PIGVQ9NUD9 493 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 GTF2IRD1Q9UHL9 959 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 GJD2Q9UKL4 321 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 WDR37Q9Y2I8 494 aa13.63□□□□□ -0.23
PCNX3-202ENST00000439247 RBMX2Q9Y388 322 aaKnown RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 ZFC3H1O60293 1989 aaKnown RBP13.63□□□□□ -0.23
PCNX3-202ENST00000439247 TMEM247A6NEH6 219 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 TRIM64CA6NLI5 447 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 TRPC5OSA6NMA1 111 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 NR5A2O00482 541 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 MT-CYBP00156 380 aaPredicted RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 ALDOCP09972 364 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CCNA1P78396 465 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms