RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ARHGEF6Q15052 776 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 LIN54Q6MZP7 749 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 CES5AQ6NT32 575 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 CCNI2Q6ZMN8 369 aaPredicted RBP4.67□□□□□ -1.66
LINC01040-201ENST00000425048 LURAP1LQ8IV03 231 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 GOLGA1Q92805 767 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 F2RL3Q96RI0 385 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 TLR8Q9NR97 1041 aaKnown RBP4.67□□□□□ -1.66
LINC01040-201ENST00000425048 CDC14AQ9UNH5 594 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 SMAD5-AS1Q9Y6J3 95 aa4.67□□□□□ -1.66
LINC01040-201ENST00000425048 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 HMX3A6NHT5 357 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 CAPN9O14815 690 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 NDUFS7O75251 213 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 NDUFB4O95168 129 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 PARNO95453 639 aaKnown RBP4.66□□□□□ -1.66
LINC01040-201ENST00000425048 CDH1P12830 882 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 CD53P19397 219 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 HNF1BP35680 557 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 PUM3Q15397 648 aaKnown RBP4.66□□□□□ -1.66
LINC01040-201ENST00000425048 SLC1A5Q15758 541 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 EFNB3Q15768 340 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 SOWAHAQ2M3V2 549 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 PPP6R3Q5H9R7 873 aaPredicted RBP4.66□□□□□ -1.66
LINC01040-201ENST00000425048 IL20RBQ6UXL0 311 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 KRBA2Q6ZNG9 492 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 PRSS45Q7RTY3 260 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 MASTLQ96GX5 879 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 TTC12Q9H892 705 aaPredicted RBP4.66□□□□□ -1.66
LINC01040-201ENST00000425048 G6PC2Q9NQR9 355 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 KLHL1Q9NR64 748 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 GEMIN8Q9NWZ8 242 aaKnown RBP4.66□□□□□ -1.66
LINC01040-201ENST00000425048 DACT1Q9NYF0 836 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 SHROOM4Q9ULL8 1493 aa4.66□□□□□ -1.66
LINC01040-201ENST00000425048 SOCS6O14544 535 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 EXTL3O43909 919 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 KRT18P05783 430 aaKnown RBP4.65□□□□□ -1.67
LINC01040-201ENST00000425048 SRD5A1P18405 259 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 GPTP24298 496 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 HNRNPH1P31943 449 aaKnown RBP4.65□□□□□ -1.67
LINC01040-201ENST00000425048 ZNF484Q5JVG2 852 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 PAPPA-AS1Q5QFB9 102 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 NAPEPLDQ6IQ20 393 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 ARHGAP11AQ6P4F7 1023 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 CD207Q9UJ71 328 aa4.65□□□□□ -1.67
LINC01040-201ENST00000425048 ACKR2O00590 384 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 ZNF8P17098 575 aaPredicted RBP4.64□□□□□ -1.67
LINC01040-201ENST00000425048 CD72P21854 359 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 ALDH4A1P30038 563 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 RYKP34925 604 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 PITX1P78337 314 aaPredicted RBP4.64□□□□□ -1.67
LINC01040-201ENST00000425048 TNFAIP2Q03169 654 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 RELQ04864 619 aaPredicted RBP4.64□□□□□ -1.67
LINC01040-201ENST00000425048 NEDD9Q14511 834 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 SLC18A3Q16572 532 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 TANGO2Q6ICL3 276 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 WDR73Q6P4I2 378 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 LINS1Q8NG48 757 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 MAGEC3Q8TD91 643 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 CSGALNACT1Q8TDX6 532 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 GDPD5Q8WTR4 605 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 RNFT2Q96EX2 444 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 CDCA5Q96FF9 252 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 RMDN3Q96TC7 470 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 PCDHGB5Q9Y5G0 923 aa4.64□□□□□ -1.67
LINC01040-201ENST00000425048 PLRG1O43660 514 aaKnown RBP4.63□□□□□ -1.67
LINC01040-201ENST00000425048 MYL1P05976 194 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 PPIGQ13427 754 aaKnown RBP eCLIP4.63□□□□□ -1.67
LINC01040-201ENST00000425048 CBWD5Q5RIA9 395 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.63□□□□□ -1.67
LINC01040-201ENST00000425048 CNBD1Q8NA66 436 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 ERGIC1Q969X5 290 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 RBM17Q96I25 401 aaKnown RBP4.63□□□□□ -1.67
LINC01040-201ENST00000425048 LITAFQ99732 161 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 ELAC2Q9BQ52 826 aaKnown RBP4.63□□□□□ -1.67
LINC01040-201ENST00000425048 KXD1Q9BQD3 176 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 WDR12Q9GZL7 423 aaKnown RBP4.63□□□□□ -1.67
LINC01040-201ENST00000425048 PCDH9Q9HC56 1237 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 C1RLQ9NZP8 487 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 PSAT1Q9Y617 370 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 ADGRF5Q8IZF2 1346 aa4.63□□□□□ -1.67
LINC01040-201ENST00000425048 TP53BP1Q12888 1972 aaPredicted RBP4.62□□□□□ -1.67
LINC01040-201ENST00000425048 PMS2P5A8MQ11 134 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 CD58P19256 250 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 KRT2P35908 639 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 NOVP48745 357 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 ICA1Q05084 483 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 RUNX2Q13950 521 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 ESCO2Q56NI9 601 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 PARP16Q8N5Y8 322 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 CADM4Q8NFZ8 388 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 LGALS12Q96DT0 336 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 CCDC136Q96JN2 1154 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 C17orf75Q9HAS0 396 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 FAM118AQ9NWS6 357 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 RALYQ9UKM9 306 aaKnown RBP4.62□□□□□ -1.67
LINC01040-201ENST00000425048 NFE2L3Q9Y4A8 694 aa4.62□□□□□ -1.67
LINC01040-201ENST00000425048 PDS5AQ29RF7 1337 aaKnown RBP4.62□□□□□ -1.67
LINC01040-201ENST00000425048 KLRF2D3W0D1 207 aa4.61□□□□□ -1.67
LINC01040-201ENST00000425048 TUBBP07437 444 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms