RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PRCCQ92733 491 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 SIPA1Q96FS4 1042 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 IFT43Q96FT9 208 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 FEM1CQ96JP0 617 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 MLPHQ9BV36 600 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 TDRD1Q9BXT4 1180 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 ADGRE3Q9BY15 652 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 TRIM31Q9BZY9 425 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 SLC6A17Q9H1V8 727 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 ITM2CQ9NQX7 267 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 DYRK4Q9NR20 520 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 UBP1Q9NZI7 540 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 TPX2Q9ULW0 747 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 SCML1Q9UN30 329 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 PCDHGC4Q9Y5F7 938 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 RAI2Q9Y5P3 530 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 ABCA7Q8IZY2 2146 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 KPNA3O00505 521 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 HTRA2O43464 458 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 LRP3O75074 770 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 GJB3O75712 270 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 PIGNO95427 931 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 C7P10643 843 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 ITIH2P19823 946 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 IVDP26440 423 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 GKP32189 559 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 MAGEA6P43360 314 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 COPAP53621 1224 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 WNT3AP56704 352 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 RPL26P61254 145 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 POLR2LP62875 67 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 MRPS25P82663 173 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 SLC7A5Q01650 507 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 ZBTB16Q05516 673 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 CDK18Q07002 472 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 CCDC15Q0P6D6 951 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 PCSK7Q16549 785 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 ZNF805Q5CZA5 627 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 IZUMO3Q5VZ72 239 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 PMS2CLQ68D20 193 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 KCTD11Q693B1 232 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 BRAT1Q6PJG6 821 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 KDELC1Q6UW63 502 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 KIAA1324Q6UXG2 1013 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 SLC36A4Q6YBV0 504 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 LPCAT2Q7L5N7 544 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 HOOK3Q86VS8 718 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 CAMK1DQ8IU85 385 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 MMAAQ8IVH4 418 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 NDUFAF2Q8N183 169 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 PDCD7Q8N8D1 485 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 LRRN4CLQ8ND94 238 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 IPMKQ8NFU5 416 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 SPOCK2Q92563 424 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 GORASP1Q9BQQ3 440 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 WHRNQ9P202 907 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 DKK3Q9UBP4 350 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 MBD1Q9UIS9 605 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 RPL26L1Q9UNX3 145 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 PCDHGA5Q9Y5G8 931 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 SPAG17Q6Q759 2223 aa16.64■□□□□ 0.25
TSPAN4-208ENST00000409531 FRYLO94915 3013 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 IGHV1OR15-9A0A0B4J2B8 117 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 AP3B1O00203 1094 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 TRAFD1O14545 582 aaPredicted RBP16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 SUN1O94901 812 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 SEC31AO94979 1220 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 EPN2O95208 641 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 DNTTP04053 509 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 CTSLP07711 333 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 HLA-DPA1P20036 260 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 C5AR1P21730 350 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 TGM1P22735 817 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 ITGB7P26010 798 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 EPHB1P54762 984 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 GUCY2DQ02846 1103 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 CAV1Q03135 178 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 SPEM2Q0P670 501 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 TRAF2Q12933 501 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 KCNJ11Q14654 390 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 MORF4L2Q15014 288 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 CST6Q15828 149 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 TTC31Q49AM3 519 aaPredicted RBP16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 RNASEH2BQ5TBB1 312 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 PDCD6IPQ8WUM4 868 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 SEC14L1Q92503 715 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 CPT1BQ92523 772 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 UBXN4Q92575 508 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 ECHDC3Q96DC8 303 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 MRGPRX2Q96LB1 330 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 KLHL32Q96NJ5 620 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 TBL1YQ9BQ87 522 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 FAM129AQ9BZQ8 928 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 ARRDC1-AS1Q9H2J1 176 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 DPH5Q9H2P9 285 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 FAM114A2Q9NRY5 505 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 SHOC2Q9UQ13 582 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 SNX24Q9Y343 169 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 PCDHB9Q9Y5E1 797 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms