RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TRIM60Q495X7 471 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 C14orf80Q86SX3 495 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 RPRD1AQ96P16 312 aaPredicted RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 TUBGCP5Q96RT8 1024 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 VAT1Q99536 393 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 KLHL4Q9C0H6 718 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 OXSMQ9NWU1 459 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 DNAJC28Q9NX36 388 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 DSEQ9UL01 958 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 RAP2CQ9Y3L5 183 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 DLX3O60479 287 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 IL1BP01584 269 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 HDCP19113 662 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 CPOXP36551 454 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SLC11A1P49279 550 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 GEMP55040 296 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 CSE1LP55060 971 aaKnown RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 PRMT2P55345 433 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 FAM83EQ2M2I3 478 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 KLC3Q6P597 504 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 CYP2R1Q6VVX0 501 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 GK5Q6ZS86 529 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 DSELQ8IZU8 1212 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 FBXW8Q8N3Y1 598 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 OR52K2Q8NGK3 314 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 HEXDCQ8WVB3 486 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SEPT8Q92599 483 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 CNBD2Q96M20 576 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SEMA6AQ9H2E6 1030 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 ALG9Q9H6U8 611 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 ADAMTS6Q9UKP5 1117 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SLC4A7Q9Y6M7 1214 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 TSPAN3O60637 253 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 PGM3O95394 542 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 LYNP07948 512 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 RPS6KA2Q15349 733 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 PSMD5Q16401 504 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 AGKQ53H12 422 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 SFT2D3Q587I9 215 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 ZNF789Q5FWF6 425 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 IYDQ6PHW0 289 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 RSPO2Q6UXX9 243 aaPredicted RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 RBM12BQ8IXT5 1001 aaKnown RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 BHLHE22Q8NFJ8 381 aaPredicted RBP12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 BRD8Q9H0E9 1235 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 TRPC7Q9HCX4 862 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 ATP11BQ9Y2G3 1177 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 DTNAQ9Y4J8 743 aa12.17□□□□□ -0.46
CAPRIN1-202ENST00000389645 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 CSPG5O95196 566 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 ALDH2P05091 517 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 HNRNPCP07910 306 aaKnown RBP eCLIP12.16□□□□□ -0.466e-7■□□□□ 9.2
CAPRIN1-202ENST00000389645 CPB1P15086 417 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 FGFR3P22607 806 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 GSTT1P30711 240 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 HARS2P49590 506 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 INHBCP55103 352 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 TUBB3Q13509 450 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 CTXN3Q4LDR2 81 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 C10orf120Q5SQS8 335 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 CYS1Q717R9 158 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 ST13P4Q8IZP2 240 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 WDR41Q9HAD4 459 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 APPL1Q9UKG1 709 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 J3KR12 359 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 STAMBPO95630 424 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 XRCC1P18887 633 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 GABRB3P28472 473 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 THOP1P52888 689 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 DSC2Q02487 901 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 DLG1Q12959 904 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 TMED1Q13445 227 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 MGAT5BQ3V5L5 792 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 RAP1GAP2Q684P5 730 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 CLEC6AQ6EIG7 209 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 DDIASQ8IXT1 998 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 EXOC2Q96KP1 924 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 RGSL1A5PLK6 1076 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 NCF1BA6NI72 391 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 NCF1CA8MVU1 366 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 TPST1O60507 370 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 NCF1P14598 390 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 CCNIQ14094 377 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 C16orf89Q6UX73 402 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 SLC39A5Q6ZMH5 540 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 BHMTQ93088 406 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 HDAC10Q969S8 669 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms