RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PXDC1Q5TGL8 231 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 AGAP6Q5VW22 663 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 CYP20A1Q6UW02 462 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 DSG4Q86SJ6 1040 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 SERINC5Q86VE9 423 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 CTAGE3PQ8IX95 158 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 ZDHHC14Q8IZN3 488 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 FANK1Q8TC84 345 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
CCNA1-201ENST00000255465 CD101Q93033 1021 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 AGAP4Q96P64 663 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 UHRF1Q96T88 793 aaPredicted RBP11.91□□□□□ -0.5
CCNA1-201ENST00000255465 ADAMTS10Q9H324 1103 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 RPRD1BQ9NQG5 326 aaKnown RBP11.91□□□□□ -0.5
CCNA1-201ENST00000255465 DTLQ9NZJ0 730 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 ST14Q9Y5Y6 855 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 STON1Q9Y6Q2 735 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 RRN3P2A6NIE6 340 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 SAC3D1A6NKF1 404 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 A8MX80 341 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 HNRNPCL2B2RXH8 293 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 H3BUI4 141 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 AKAP10O43572 662 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 PROCP04070 461 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 YES1P07947 543 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 L1CAMP32004 1257 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 HTR7P34969 479 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 GRK3P35626 688 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 PPP5CP53041 499 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 AP1S2P56377 157 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 PRAMEP78395 509 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 SPATC1Q76KD6 591 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 TRMT1LQ7Z2T5 733 aaKnown RBP11.91□□□□□ -0.5
CCNA1-201ENST00000255465 CAMK1DQ8IU85 385 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 DEFB107AQ8IZN7 70 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 MFSD4AQ8N468 514 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 OR6F1Q8NGZ6 308 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 MZB1Q8WU39 189 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 WNT8BQ93098 351 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 BTBD6Q96KE9 485 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 TSNARE1Q96NA8 513 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
CCNA1-201ENST00000255465 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
CCNA1-201ENST00000255465 MTMR12Q9C0I1 747 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 ZC4H2Q9NQZ6 224 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 B3GNT2Q9NY97 397 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 DNMT3LQ9UJW3 386 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 TCAF1Q9Y4C2 921 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 SIP14410 1827 aa11.91□□□□□ -0.5
CCNA1-201ENST00000255465 C7orf72A4D263 438 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 OR6C65A6NJZ3 312 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 C12orf71A8MTZ7 269 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 TRDMT1O14717 391 aaKnown RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 LPXNO60711 386 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 NOS1APO75052 506 aaPredicted RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 BCAS2O75934 225 aaPredicted RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 RAP1GAPP47736 663 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 NR2C2P49116 596 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 CLCNKBP51801 687 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 NDST1P52848 882 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 PRKAA2P54646 552 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 CCL23P55773 120 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 NME5P56597 212 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 EIF3EP60228 445 aaKnown RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 POU6F2P78424 691 aaPredicted RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 IKZF1Q13422 519 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 SNTA1Q13424 505 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 BFSP2Q13515 415 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 FLOT2Q14254 428 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 TBRG1Q3YBR2 411 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 BRMS1LQ5PSV4 323 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 METTL11BQ5VVY1 283 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 LETMD1Q6P1Q0 360 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 SV2BQ7L1I2 683 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 FRMD5Q7Z6J6 570 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 SLC9A9Q8IVB4 645 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 LIX1LQ8IVB5 337 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 TRAPPC12Q8WVT3 735 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 PMM1Q92871 262 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 SGK3Q96BR1 496 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 PKP2Q99959 881 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 MCMBPQ9BTE3 642 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 ZSCAN5AQ9BUG6 496 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 TM9SF3Q9HD45 589 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 OSGEPQ9NPF4 335 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 EIF3KQ9UBQ5 218 aaKnown RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 DIMT1Q9UNQ2 313 aaKnown RBP11.9□□□□□ -0.5
CCNA1-201ENST00000255465 TMEM5Q9Y2B1 443 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 GRIP1Q9Y3R0 1128 aa11.9□□□□□ -0.5
CCNA1-201ENST00000255465 A0A1B0GTW7 788 aa11.89□□□□□ -0.51
CCNA1-201ENST00000255465 A0A1W2PPM1 405 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms