RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CDC14AQ9UNH5 594 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 CROCCQ5TZA2 2017 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 TIMM44O43615 452 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 CBFA2T3O75081 653 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 F9P00740 461 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 CHRNA1P02708 482 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 TPH1P17752 444 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 GLRBP48167 497 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 RALGDSQ12967 914 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 MPP3Q13368 585 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 PAN2Q504Q3 1202 aaKnown RBP19.06■□□□□ 0.64
SNX4-201ENST00000251775 TAC4Q86UU9 113 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 DUS3LQ96G46 650 aaKnown RBP19.06■□□□□ 0.64
SNX4-201ENST00000251775 CELF6Q96J87 481 aaKnown RBP19.06■□□□□ 0.64
SNX4-201ENST00000251775 UNC93B1Q9H1C4 597 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 CSNK1G1Q9HCP0 422 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 CHRAC1Q9NRG0 131 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 CDH7Q9ULB5 785 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 SLC39A10Q9ULF5 831 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 CNOT6Q9ULM6 557 aaKnown RBP19.06■□□□□ 0.64
SNX4-201ENST00000251775 PRORSD1PA6NEY8 169 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 ZNF701M0R085 212 aaPredicted RBP19.06■□□□□ 0.64
SNX4-201ENST00000251775 GABRB3P28472 473 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 SLC5A3P53794 718 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 GDF6Q6KF10 455 aaPredicted RBP19.06■□□□□ 0.64
SNX4-201ENST00000251775 KDM1BQ8NB78 822 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 TFAP2CQ92754 450 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 DPF3Q92784 378 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 APBA2Q99767 749 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 BRD8Q9H0E9 1235 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 TRHDEQ9UKU6 1024 aa19.06■□□□□ 0.64
SNX4-201ENST00000251775 ERI2A8K979 691 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 PSMD12O00232 456 aaPredicted RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 SOCS2O14508 198 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 MTSS1O43312 755 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 JCHAINP01591 159 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 IGHA2P01877 340 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 PRKAA2P54646 552 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 TAF1CQ15572 869 aaPredicted RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 UPP1Q16831 310 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 KCTD21Q4G0X4 260 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 CYP2R1Q6VVX0 501 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 ZBTB49Q6ZSB9 765 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 CHSY3Q70JA7 882 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 HMGCLL1Q8TB92 370 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 VPS50Q96JG6 964 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 MAELQ96JY0 434 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 TEKT5Q96M29 485 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 TUBA8Q9NY65 449 aaPredicted RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 SCN10AQ9Y5Y9 1956 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 A0A087WXM4 84 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 SDHDO14521 159 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 PHGDHO43175 533 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 ZNF189O75820 626 aaPredicted RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 BDNFP23560 247 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 CSE1LP55060 971 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 ESRRGP62508 458 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 PRAMEP78395 509 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 TRAP1Q12931 704 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 LRP8Q14114 963 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 GRM3Q14832 879 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 PM20D1Q6GTS8 502 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 PPP4R4Q6NUP7 873 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 CXCL17Q6UXB2 119 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 ADAMTS16Q8TE57 1224 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 HIPK3Q9H422 1215 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 AGO3Q9H9G7 860 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 MRPL40Q9NQ50 206 aaKnown RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 TMLHEQ9NVH6 421 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 CACNA2D2Q9NY47 1150 aa19.05■□□□□ 0.64
SNX4-201ENST00000251775 COL4A4P53420 1690 aaPredicted RBP19.05■□□□□ 0.64
SNX4-201ENST00000251775 HEATR9A2RTY3 570 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 DDHD2O94830 711 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 ATE1O95260 518 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 PCSK1P29120 753 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 CCR3P51677 355 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 FRG1Q14331 258 aaKnown RBP19.04■□□□□ 0.64
SNX4-201ENST00000251775 C1QTNF12Q5T7M4 302 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 KCNMB4Q86W47 210 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 PELI3Q8N2H9 469 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.04■□□□□ 0.64
SNX4-201ENST00000251775 TRPV1Q8NER1 839 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 STYXQ8WUJ0 223 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 SARDHQ9UL12 918 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 TARM1B6A8C7 271 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 FBP2O00757 339 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 DLX3O60479 287 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 TIPRLO75663 272 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 GNAO1P09471 354 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 NMBRP28336 390 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 BRCC3P46736 316 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 NPY2RP49146 381 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 PSMD7P51665 324 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 TGFBIQ15582 683 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 ANO4Q32M45 955 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 GNASQ5JWF2 1037 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 C6orf10Q5SRN2 563 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 RWDD4Q6NW29 188 aaKnown RBP19.04■□□□□ 0.64
SNX4-201ENST00000251775 LYSMD3Q7Z3D4 306 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 ANKFN1Q8N957 763 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms