RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W GIS4Q04233 774 aa3.52□□□□□ -1.85
BRO1YPL084W ALG14P38242 237 aa3.52□□□□□ -1.85
BRO1YPL084W EXO5P38289 585 aa3.52□□□□□ -1.85
BRO1YPL084W TED1P40533 473 aa3.52□□□□□ -1.85
BRO1YPL084W LEM3P42838 414 aa3.52□□□□□ -1.85
BRO1YPL084W RTT10Q08924 1013 aa3.52□□□□□ -1.85
BRO1YPL084W DPH6Q12429 685 aa3.52□□□□□ -1.85
BRO1YPL084W HEM13P11353 328 aaKnown RBP3.51□□□□□ -1.85
BRO1YPL084W PAN5P38787 379 aa3.51□□□□□ -1.85
BRO1YPL084W FAA4P47912 694 aaKnown RBP3.51□□□□□ -1.85
BRO1YPL084W YGR035CP53222 116 aa3.51□□□□□ -1.85
BRO1YPL084W WRS1Q12109 432 aaKnown RBP3.51□□□□□ -1.85
BRO1YPL084W NNF1P47149 201 aa3.51□□□□□ -1.85
BRO1YPL084W UTP22P53254 1237 aaPredicted RBP3.51□□□□□ -1.85
BRO1YPL084W SPO71Q03868 1245 aa3.51□□□□□ -1.85
BRO1YPL084W HDA2Q06629 674 aa3.51□□□□□ -1.85
BRO1YPL084W TY1A-LR4P0C2I8 440 aaKnown RBP3.5□□□□□ -1.85
BRO1YPL084W TY1A-DR6P0CX70 440 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-ER1P0CX71 440 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-LR2P0CX72 440 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-PLP0CX73 440 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-JR1P0CX74 440 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-LR3P0CX75 440 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-ML2P0CX76 440 aa3.5□□□□□ -1.85
BRO1YPL084W SEC23P15303 768 aaKnown RBP3.5□□□□□ -1.85
BRO1YPL084W VMA4P22203 233 aaKnown RBP3.5□□□□□ -1.85
BRO1YPL084W DUT1P33317 147 aa3.5□□□□□ -1.85
BRO1YPL084W ORC1P54784 914 aaPredicted RBP3.5□□□□□ -1.85
BRO1YPL084W YIG1Q08956 461 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-GR1Q12085 440 aa3.5□□□□□ -1.85
BRO1YPL084W SLP1Q12232 587 aa3.5□□□□□ -1.85
BRO1YPL084W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.5□□□□□ -1.85
BRO1YPL084W TY1A-OLQ92392 440 aaKnown RBP3.5□□□□□ -1.85
BRO1YPL084W TY4B-PA0A0B7P3V8 1104 aa3.5□□□□□ -1.85
BRO1YPL084W POL5P39985 1022 aaKnown RBP3.5□□□□□ -1.85
BRO1YPL084W SLS1P42900 643 aa3.5□□□□□ -1.85
BRO1YPL084W YGR053CP53234 283 aa3.5□□□□□ -1.85
BRO1YPL084W REC8Q12188 680 aa3.5□□□□□ -1.85
BRO1YPL084W TY4A-HQ6Q5P6 413 aa3.5□□□□□ -1.85
BRO1YPL084W NHA1Q99271 985 aa3.5□□□□□ -1.85
BRO1YPL084W PRI2P20457 528 aa3.49□□□□□ -1.85
BRO1YPL084W RAD27P26793 382 aa3.49□□□□□ -1.85
BRO1YPL084W RDH54P38086 958 aa3.49□□□□□ -1.85
BRO1YPL084W OCA5P38738 679 aa3.49□□□□□ -1.85
BRO1YPL084W DED1P06634 604 aaKnown RBP3.49□□□□□ -1.85
BRO1YPL084W SAC7P17121 654 aa3.49□□□□□ -1.85
BRO1YPL084W TMA46Q12000 345 aaKnown RBP3.49□□□□□ -1.85
BRO1YPL084W SSF2Q12153 453 aaPredicted RBP3.49□□□□□ -1.85
BRO1YPL084W TAF13P11747 167 aa3.48□□□□□ -1.85
BRO1YPL084W MTR4P47047 1073 aaKnown RBP3.48□□□□□ -1.85
BRO1YPL084W GNP1P48813 663 aa3.48□□□□□ -1.85
BRO1YPL084W UTP5Q04177 643 aaKnown RBP3.48□□□□□ -1.85
BRO1YPL084W YMR074CQ04773 145 aa3.48□□□□□ -1.85
BRO1YPL084W ERS1P17261 260 aa3.48□□□□□ -1.85
BRO1YPL084W NEM1P38757 446 aa3.48□□□□□ -1.85
BRO1YPL084W SIW14P53965 281 aa3.48□□□□□ -1.85
BRO1YPL084W MEC3Q02574 474 aa3.48□□□□□ -1.85
BRO1YPL084W ROD1Q02805 837 aa3.48□□□□□ -1.85
BRO1YPL084W EST2Q06163 884 aa3.48□□□□□ -1.85
BRO1YPL084W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85 RIP-Chip
BRO1YPL084W ATG14P38270 344 aa3.47□□□□□ -1.85
BRO1YPL084W REI1P38344 393 aaPredicted RBP3.47□□□□□ -1.85
BRO1YPL084W HXT13P39924 564 aa3.47□□□□□ -1.85
BRO1YPL084W GCV1P48015 400 aa3.47□□□□□ -1.85
BRO1YPL084W HXT17P53631 564 aa3.47□□□□□ -1.85
BRO1YPL084W YNR014WP53719 212 aa3.47□□□□□ -1.85
BRO1YPL084W YNR063WP53749 607 aa3.47□□□□□ -1.85
BRO1YPL084W HXT15P54854 567 aa3.47□□□□□ -1.85
BRO1YPL084W EEB1Q02891 456 aa3.47□□□□□ -1.85
BRO1YPL084W OPI10Q08202 246 aa3.47□□□□□ -1.85
BRO1YPL084W ALG6Q12001 544 aaKnown RBP3.47□□□□□ -1.85
BRO1YPL084W ELG1Q12050 791 aa3.47□□□□□ -1.85
BRO1YPL084W GRX1P25373 110 aaKnown RBP3.47□□□□□ -1.85
BRO1YPL084W RER2P35196 286 aa3.47□□□□□ -1.85
BRO1YPL084W MAE1P36013 669 aaKnown RBP3.47□□□□□ -1.85
BRO1YPL084W ADD66P36040 267 aa3.47□□□□□ -1.85
BRO1YPL084W RRM3P38766 723 aa3.47□□□□□ -1.85
BRO1YPL084W BOI2P39969 1040 aa3.47□□□□□ -1.85
BRO1YPL084W TYW3P53177 273 aa3.47□□□□□ -1.85
BRO1YPL084W DSE4P53753 1117 aa3.47□□□□□ -1.85
BRO1YPL084W FAR11P53917 953 aa3.47□□□□□ -1.85
BRO1YPL084W FAL1Q12099 399 aaKnown RBP3.47□□□□□ -1.85
BRO1YPL084W YOL098CQ12496 1037 aa3.47□□□□□ -1.85
BRO1YPL084W YTA7P40340 1379 aa3.46□□□□□ -1.85
BRO1YPL084W BAS1P22035 811 aa3.46□□□□□ -1.85
BRO1YPL084W ARL1P38116 183 aaKnown RBP3.46□□□□□ -1.85
BRO1YPL084W SBE2P42223 864 aaKnown RBP3.46□□□□□ -1.85
BRO1YPL084W SPO74P45819 413 aa3.46□□□□□ -1.85
BRO1YPL084W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.46□□□□□ -1.85not detected
BRO1YPL084W TRP2P00899 507 aaKnown RBP3.46□□□□□ -1.86
BRO1YPL084W AI1P03875 834 aa3.46□□□□□ -1.86
BRO1YPL084W TRK2P28584 889 aa3.46□□□□□ -1.86
BRO1YPL084W MKK2P32491 506 aa3.46□□□□□ -1.86
BRO1YPL084W YKL069WP36088 180 aa3.46□□□□□ -1.86
BRO1YPL084W YLL054CQ12244 843 aa3.46□□□□□ -1.86
BRO1YPL084W AIM44Q99299 758 aa3.46□□□□□ -1.86
BRO1YPL084W KIP3P53086 805 aaKnown RBP3.45□□□□□ -1.86
BRO1YPL084W RAT1Q02792 1006 aaKnown RBP3.45□□□□□ -1.86
BRO1YPL084W TDA5Q06417 326 aaKnown RBP3.45□□□□□ -1.86
BRO1YPL084W AVO1Q08236 1176 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms