RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.91	□□□□□ -1.14	not detected
CSL4	YNL232W	YDR461C-A	Q2V2P7	80 aa		7.91	□□□□□ -1.14
CSL4	YNL232W	RTG2	P32608	588 aa	Known RBP	7.9	□□□□□ -1.14
CSL4	YNL232W	YJL007C	P47080	104 aa		7.9	□□□□□ -1.14
CSL4	YNL232W	IRE1	P32361	1115 aa		7.89	□□□□□ -1.15
CSL4	YNL232W	RPS9B	P05755	195 aa	Known RBP	7.88	□□□□□ -1.15
CSL4	YNL232W	PDI1	P17967	522 aa	Known RBP	7.88	□□□□□ -1.15
CSL4	YNL232W	SHC1	P39000	512 aa		7.88	□□□□□ -1.15
CSL4	YNL232W	AUS1	Q08409	1394 aa		7.86	□□□□□ -1.15
CSL4	YNL232W	SBE2	P42223	864 aa	Known RBP	7.86	□□□□□ -1.15
CSL4	YNL232W	ERO1	Q03103	563 aa		7.86	□□□□□ -1.15
CSL4	YNL232W	SEC3	P33332	1336 aa	Known RBP	7.85	□□□□□ -1.15
CSL4	YNL232W	SWI5	P08153	709 aa		7.85	□□□□□ -1.15
CSL4	YNL232W	YIL089W	P40500	205 aa		7.85	□□□□□ -1.15
CSL4	YNL232W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.85	□□□□□ -1.15	not detected
CSL4	YNL232W	ORC1	P54784	914 aa	Predicted RBP	7.85	□□□□□ -1.15
CSL4	YNL232W	YPQ2	Q06328	317 aa		7.85	□□□□□ -1.15
CSL4	YNL232W	PSH1	Q12161	406 aa		7.85	□□□□□ -1.15
CSL4	YNL232W	FIG2	P25653	1609 aa		7.85	□□□□□ -1.15
CSL4	YNL232W	LPD1	P09624	499 aa	Known RBP	7.84	□□□□□ -1.15
CSL4	YNL232W	YKU70	P32807	602 aa		7.84	□□□□□ -1.15
CSL4	YNL232W	NUP145	P49687	1317 aa		7.83	□□□□□ -1.16
CSL4	YNL232W	PDC6	P26263	563 aa	Known RBP	7.83	□□□□□ -1.16
CSL4	YNL232W	AIM9	P40053	627 aa	Known RBP	7.83	□□□□□ -1.16
CSL4	YNL232W	RPS31	P05759	152 aa	Known RBP	7.82	□□□□□ -1.16
CSL4	YNL232W	MRPL16	P38064	232 aa		7.82	□□□□□ -1.16
CSL4	YNL232W	CAF20	P12962	161 aa	Known RBP	7.81	□□□□□ -1.16
CSL4	YNL232W	FPS1	P23900	669 aa		7.81	□□□□□ -1.16
CSL4	YNL232W	BIM1	P40013	344 aa		7.81	□□□□□ -1.16
CSL4	YNL232W	CCT8	P47079	568 aa	Known RBP	7.81	□□□□□ -1.16
CSL4	YNL232W	MRX10	Q05648	414 aa		7.81	□□□□□ -1.16
CSL4	YNL232W	TDA6	Q06466	467 aa		7.81	□□□□□ -1.16
CSL4	YNL232W	HIM1	Q06674	414 aa		7.81	□□□□□ -1.16
CSL4	YNL232W	GRX4	P32642	244 aa		7.8	□□□□□ -1.16
CSL4	YNL232W	IRC3	Q06683	689 aa		7.8	□□□□□ -1.16
CSL4	YNL232W	TIF6	Q12522	245 aa	Known RBP	7.8	□□□□□ -1.16
CSL4	YNL232W	YPR053C	Q6Q5F3	151 aa		7.8	□□□□□ -1.16
CSL4	YNL232W	ENO1	P00924	437 aa	Known RBP	7.79	□□□□□ -1.16
CSL4	YNL232W	GPM1	P00950	247 aa	Known RBP	7.79	□□□□□ -1.16
CSL4	YNL232W	SER1	P33330	395 aa	Known RBP	7.79	□□□□□ -1.16
CSL4	YNL232W	ATG32	P40458	529 aa		7.79	□□□□□ -1.16
CSL4	YNL232W	FET4	P40988	552 aa		7.79	□□□□□ -1.16
CSL4	YNL232W	TAP42	Q04372	366 aa		7.79	□□□□□ -1.16
CSL4	YNL232W	BDF2	Q07442	638 aa		7.79	□□□□□ -1.16
CSL4	YNL232W	STB3	Q12427	513 aa		7.79	□□□□□ -1.16
CSL4	YNL232W	HKR1	P41809	1802 aa		7.78	□□□□□ -1.16
CSL4	YNL232W	RPS6A	P0CX37	236 aa	Known RBP	7.78	□□□□□ -1.16
CSL4	YNL232W	RPS6B	P0CX38	236 aa	Predicted RBP	7.78	□□□□□ -1.16
CSL4	YNL232W	RAT1	Q02792	1006 aa	Known RBP	7.78	□□□□□ -1.16
CSL4	YNL232W	GRX6	Q12438	231 aa		7.78	□□□□□ -1.16
CSL4	YNL232W	TIF1	P10081	395 aa	Known RBP	7.77	□□□□□ -1.17
CSL4	YNL232W	HSP104	P31539	908 aa	Known RBP	7.77	□□□□□ -1.17
CSL4	YNL232W	YNL165W	P53891	406 aa		7.77	□□□□□ -1.17
CSL4	YNL232W	RMT2	Q03305	412 aa		7.77	□□□□□ -1.17
CSL4	YNL232W	MSM1	P22438	575 aa		7.76	□□□□□ -1.17
CSL4	YNL232W	NTH2	P35172	780 aa		7.76	□□□□□ -1.17
CSL4	YNL232W	PEA2	P40091	420 aa		7.76	□□□□□ -1.17
CSL4	YNL232W	SPR3	P41901	512 aa		7.76	□□□□□ -1.17
CSL4	YNL232W	YNR014W	P53719	212 aa		7.76	□□□□□ -1.17
CSL4	YNL232W	SCT1	P32784	759 aa		7.75	□□□□□ -1.17
CSL4	YNL232W	PAM1	P37304	830 aa	Known RBP	7.75	□□□□□ -1.17
CSL4	YNL232W	SKN7	P38889	622 aa		7.75	□□□□□ -1.17
CSL4	YNL232W	YFL034W	P43564	1073 aa		7.75	□□□□□ -1.17
CSL4	YNL232W	YFR016C	P43597	1233 aa	Known RBP	7.75	□□□□□ -1.17
CSL4	YNL232W	NCS6	P53088	359 aa		7.75	□□□□□ -1.17
CSL4	YNL232W	DSD1	P53095	428 aa		7.75	□□□□□ -1.17
CSL4	YNL232W	MDG1	P53885	366 aa		7.74	□□□□□ -1.17
CSL4	YNL232W	CTF4	Q01454	927 aa		7.74	□□□□□ -1.17
CSL4	YNL232W	TIM50	Q02776	476 aa		7.74	□□□□□ -1.17
CSL4	YNL232W	YMR187C	Q03236	431 aa		7.74	□□□□□ -1.17
CSL4	YNL232W	GSC2	P40989	1895 aa		7.74	□□□□□ -1.17
CSL4	YNL232W	VPS13	Q07878	3144 aa		7.74	□□□□□ -1.17
CSL4	YNL232W	LEU1	P07264	779 aa	Known RBP	7.73	□□□□□ -1.17
CSL4	YNL232W	YGL082W	P53155	381 aa		7.73	□□□□□ -1.17
CSL4	YNL232W	MCM1	P11746	286 aa		7.72	□□□□□ -1.17
CSL4	YNL232W	CWC15	Q03772	175 aa	Known RBP	7.72	□□□□□ -1.17
CSL4	YNL232W	DIB1	Q06819	143 aa	Predicted RBP	7.72	□□□□□ -1.17
CSL4	YNL232W	TSC13	Q99190	310 aa		7.72	□□□□□ -1.17
CSL4	YNL232W	HVG1	P0CE11	249 aa		7.71	□□□□□ -1.18
CSL4	YNL232W	PEP12	P32854	288 aa		7.71	□□□□□ -1.18
CSL4	YNL232W	MCX1	P38323	520 aa	Predicted RBP	7.71	□□□□□ -1.18
CSL4	YNL232W	TY1A-DR2	Q03964	440 aa	Known RBP	7.71	□□□□□ -1.18
CSL4	YNL232W	PDC5	P16467	563 aa	Known RBP	7.7	□□□□□ -1.18
CSL4	YNL232W	BOI2	P39969	1040 aa		7.7	□□□□□ -1.18
CSL4	YNL232W	RPL34B	P40525	121 aa	Known RBP	7.7	□□□□□ -1.18
CSL4	YNL232W	YGR117C	P53270	476 aa		7.7	□□□□□ -1.18
CSL4	YNL232W	UBP16	Q02863	499 aa		7.7	□□□□□ -1.18
CSL4	YNL232W	KNS1	P32350	737 aa	Predicted RBP	7.69	□□□□□ -1.18
CSL4	YNL232W	MAL31	P38156	614 aa		7.69	□□□□□ -1.18
CSL4	YNL232W	BSD2	P38356	321 aa		7.69	□□□□□ -1.18
CSL4	YNL232W	TRM44	Q02648	567 aa	Known RBP	7.69	□□□□□ -1.18
CSL4	YNL232W	YCK2	P23292	546 aa	Known RBP	7.68	□□□□□ -1.18
CSL4	YNL232W	MLF3	P32047	452 aa		7.68	□□□□□ -1.18
CSL4	YNL232W	FRD1	P32614	470 aa	Known RBP	7.68	□□□□□ -1.18
CSL4	YNL232W	MSC7	P38694	644 aa		7.68	□□□□□ -1.18
CSL4	YNL232W	ALE1	Q08548	619 aa		7.68	□□□□□ -1.18
CSL4	YNL232W	Q0182	Q9ZZW1	134 aa		7.68	□□□□□ -1.18
CSL4	YNL232W	YTA6	P40328	754 aa		7.67	□□□□□ -1.18
CSL4	YNL232W	VPS4	P52917	437 aa		7.67	□□□□□ -1.18
CSL4	YNL232W	CSR2	Q12734	1121 aa		7.67	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms