RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	SFP1	P32432	683 aa		2.77	□□□□□ -1.97
KRE33	YNL132W	ECM32	P32644	1121 aa	Known RBP	2.77	□□□□□ -1.97
KRE33	YNL132W	PIM1	P36775	1133 aa		2.77	□□□□□ -1.97
KRE33	YNL132W	MAM1	P40065	302 aa		2.77	□□□□□ -1.97
KRE33	YNL132W	YMR111C	Q04461	462 aa	Predicted RBP	2.77	□□□□□ -1.97
KRE33	YNL132W	TSR3	Q12094	313 aa	Known RBP	2.77	□□□□□ -1.97
KRE33	YNL132W	GCN2	P15442	1659 aa		2.77	□□□□□ -1.97
KRE33	YNL132W	ATP4	P05626	244 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	PIF1	P07271	859 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	ACE2	P21192	770 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	GRX1	P25373	110 aa	Known RBP	2.76	□□□□□ -1.97
KRE33	YNL132W	KRR1	P25586	316 aa	Predicted RBP	2.76	□□□□□ -1.97
KRE33	YNL132W	PXA2	P34230	853 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	GTT3	P39996	337 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
KRE33	YNL132W	MRX10	Q05648	414 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	NUT2	Q06213	157 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	RIX7	Q07844	837 aa	Known RBP	2.76	□□□□□ -1.97
KRE33	YNL132W	CLP1	Q08685	445 aa	Predicted RBP	2.76	□□□□□ -1.97
KRE33	YNL132W	CDC31	P06704	161 aa	Known RBP	2.76	□□□□□ -1.97
KRE33	YNL132W	HAP4	P14064	554 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	CSE4	P36012	229 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	NPR2	P39923	615 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	VPS4	P52917	437 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	PKH3	Q03306	898 aa	Predicted RBP	2.76	□□□□□ -1.97
KRE33	YNL132W	RAD59	Q12223	238 aa		2.76	□□□□□ -1.97
KRE33	YNL132W	CIT1	P00890	479 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	CYT1	P07143	309 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	MEF1	P25039	761 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	MET4	P32389	672 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	ESL2	P36168	1195 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	BBC1	P47068	1157 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	CTH1	P47976	325 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	UBX4	P54730	416 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	DBP10	Q12389	995 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	MPD2	Q99316	277 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	RRP5	Q05022	1729 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	MIP1	P15801	1254 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	VMA8	P32610	256 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	LEM3	P42838	414 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	PEX21	P50091	288 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	BNI4	P53858	892 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	SAS4	Q04003	481 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	YDR286C	Q05530	114 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	PGS1	P25578	521 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	RPL5	P26321	297 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	YKL050C	P35736	922 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	RRN3	P36070	627 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	RTG3	P38165	486 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	MNT3	P40549	630 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	DOT5	P40553	215 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	GPP1	P41277	250 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	HLJ1	P48353	224 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	YGR237C	P50089	785 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	SPC105	P53148	917 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	ALO1	P54783	526 aa	Known RBP	2.75	□□□□□ -1.97
KRE33	YNL132W	LAP2	Q10740	671 aa		2.75	□□□□□ -1.97
KRE33	YNL132W	NUP145	P49687	1317 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	RPT1	P33299	467 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	STO1	P34160	861 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	EXO84	P38261	753 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	RIM21	P48565	533 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	CWC15	Q03772	175 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	TAP42	Q04372	366 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	UTP13	Q05946	817 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	SWA2	Q06677	668 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	YOL087C	Q99247	1116 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	STF1	P01098	86 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	SST2	P11972	698 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	MER1	P16523	270 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	PRI2	P20457	528 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	APN1	P22936	367 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	IME2	P32581	645 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	PTH2	P34222	208 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	YKL100C	P34248	587 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	MOT2	P34909	587 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	TIF5	P38431	405 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	HAL5	P38970	855 aa	Known RBP	2.74	□□□□□ -1.97
KRE33	YNL132W	ALR1	Q08269	859 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	PPM2	Q08282	695 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	SRF1	Q12516	437 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	SRB8	P25648	1427 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	EDE1	P34216	1381 aa		2.74	□□□□□ -1.97
KRE33	YNL132W	FUR4	P05316	633 aa	Known RBP	2.73	□□□□□ -1.97
KRE33	YNL132W	GLK1	P17709	500 aa	Known RBP	2.73	□□□□□ -1.97
KRE33	YNL132W	PRP45	P28004	379 aa	Predicted RBP	2.73	□□□□□ -1.97
KRE33	YNL132W	PET112	P33893	541 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	CHZ1	P40019	153 aa	Predicted RBP	2.73	□□□□□ -1.97
KRE33	YNL132W	QDR1	P40475	563 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	BUL2	Q03758	920 aa	Known RBP	2.73	□□□□□ -1.97
KRE33	YNL132W	GAL2	P13181	574 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	ARG8	P18544	423 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	DPH2	P32461	534 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	NIP100	P33420	868 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	NUP120	P35729	1037 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	RIX1	P38883	763 aa	Predicted RBP	2.73	□□□□□ -1.97
KRE33	YNL132W	MEF2	P39677	819 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	BOL3	P39724	118 aa		2.73	□□□□□ -1.97
KRE33	YNL132W	AIM20	P40451	204 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms