RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W PEX29Q03370 554 aa8.6□□□□□ -1.03
HDA1YNL021W CEF1Q03654 590 aaPredicted RBP8.6□□□□□ -1.03
HDA1YNL021W PML39Q03760 334 aa8.6□□□□□ -1.03
HDA1YNL021W DAL4Q04895 635 aa8.6□□□□□ -1.03
HDA1YNL021W EEB1Q02891 456 aa8.59□□□□□ -1.03
HDA1YNL021W MMS1Q06211 1407 aa8.59□□□□□ -1.03
HDA1YNL021W YSP2Q06681 1438 aa8.59□□□□□ -1.03
HDA1YNL021W TRP5P00931 707 aaKnown RBP8.59□□□□□ -1.03
HDA1YNL021W MRPS18P42847 217 aa8.59□□□□□ -1.03
HDA1YNL021W PIF1P07271 859 aa8.58□□□□□ -1.04
HDA1YNL021W PIC2P40035 300 aa8.58□□□□□ -1.04
HDA1YNL021W HXT10P43581 546 aa8.58□□□□□ -1.04
HDA1YNL021W MCD1Q12158 566 aa8.58□□□□□ -1.04
HDA1YNL021W NPL4P33755 580 aa8.57□□□□□ -1.04
HDA1YNL021W YBR184WP38299 523 aa8.57□□□□□ -1.04
HDA1YNL021W ESC2Q06340 456 aa8.57□□□□□ -1.04
HDA1YNL021W TMA17Q12513 150 aa8.57□□□□□ -1.04
HDA1YNL021W IES5P40060 125 aa8.57□□□□□ -1.04
HDA1YNL021W INP54Q08227 384 aaKnown RBP8.57□□□□□ -1.04
HDA1YNL021W GCR1P07261 785 aa8.56□□□□□ -1.04
HDA1YNL021W MSH2P25847 964 aa8.56□□□□□ -1.04
HDA1YNL021W GCD11P32481 527 aaKnown RBP8.56□□□□□ -1.04
HDA1YNL021W YGR125WP53273 1036 aa8.56□□□□□ -1.04
HDA1YNL021W ELP4Q02884 456 aaKnown RBP8.56□□□□□ -1.04
HDA1YNL021W YPL109CQ02981 657 aa8.56□□□□□ -1.04
HDA1YNL021W COG4Q06096 861 aa8.56□□□□□ -1.04
HDA1YNL021W ATG13Q06628 738 aa8.56□□□□□ -1.04
HDA1YNL021W BUD20Q08004 166 aaPredicted RBP8.56□□□□□ -1.04
HDA1YNL021W SLX4Q12098 748 aa8.56□□□□□ -1.04
HDA1YNL021W SEC7P11075 2009 aaKnown RBP8.56□□□□□ -1.04
HDA1YNL021W KIP2P28743 706 aa8.56□□□□□ -1.04
HDA1YNL021W RPL8BP29453 256 aaKnown RBP8.56□□□□□ -1.04
HDA1YNL021W TGL2P54857 326 aa8.56□□□□□ -1.04
HDA1YNL021W PRP40P33203 583 aaKnown RBP8.55□□□□□ -1.04
HDA1YNL021W PFD1P46988 109 aa8.55□□□□□ -1.04
HDA1YNL021W GIR2Q03768 265 aaPredicted RBP8.55□□□□□ -1.04
HDA1YNL021W MCM5P29496 775 aaKnown RBP8.54□□□□□ -1.04
HDA1YNL021W TPD3P31383 635 aa8.54□□□□□ -1.04
HDA1YNL021W SNF7P39929 240 aaKnown RBP8.54□□□□□ -1.04
HDA1YNL021W YJR115WP47152 169 aa8.54□□□□□ -1.04
HDA1YNL021W JIP4Q03361 876 aa8.54□□□□□ -1.04
HDA1YNL021W HXT8P40886 569 aa8.54□□□□□ -1.04
HDA1YNL021W MAL11P53048 616 aa8.54□□□□□ -1.04
HDA1YNL021W SPO20Q04359 397 aa8.54□□□□□ -1.04
HDA1YNL021W FAL1Q12099 399 aaKnown RBP8.54□□□□□ -1.04
HDA1YNL021W RGD2P43556 714 aa8.53□□□□□ -1.04
HDA1YNL021W RTA1P53047 317 aa8.53□□□□□ -1.04
HDA1YNL021W DRS2P39524 1355 aa8.53□□□□□ -1.04
HDA1YNL021W GCN2P15442 1659 aa8.53□□□□□ -1.04
HDA1YNL021W CIT1P00890 479 aa8.53□□□□□ -1.04
HDA1YNL021W RRD1P40454 393 aaKnown RBP8.53□□□□□ -1.04
HDA1YNL021W GPG1P53130 126 aa8.53□□□□□ -1.04
HDA1YNL021W YGR021WP53212 290 aa8.53□□□□□ -1.04
HDA1YNL021W YPQ2Q06328 317 aa8.53□□□□□ -1.04
HDA1YNL021W BNR1P40450 1375 aa8.52□□□□□ -1.04
HDA1YNL021W BAS1P22035 811 aa8.52□□□□□ -1.05
HDA1YNL021W VMA3P25515 160 aa8.52□□□□□ -1.05
HDA1YNL021W POL5P39985 1022 aaKnown RBP8.52□□□□□ -1.05
HDA1YNL021W GNP1P48813 663 aa8.52□□□□□ -1.05
HDA1YNL021W YCS4Q06156 1176 aa8.52□□□□□ -1.05
HDA1YNL021W DPS1P04802 557 aaKnown RBP8.51□□□□□ -1.05
HDA1YNL021W PUF4P25339 888 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
HDA1YNL021W SMC1P32908 1225 aa8.51□□□□□ -1.05
HDA1YNL021W SND1Q04007 877 aa8.51□□□□□ -1.05
HDA1YNL021W SRF1Q12516 437 aa8.51□□□□□ -1.05
HDA1YNL021W TRM3Q07527 1436 aa8.51□□□□□ -1.05
HDA1YNL021W FMP25Q08023 583 aa8.51□□□□□ -1.05
HDA1YNL021W RTT10Q08924 1013 aa8.51□□□□□ -1.05
HDA1YNL021W KXD1P53158 218 aa8.5□□□□□ -1.05
HDA1YNL021W TAF8Q03750 510 aa8.5□□□□□ -1.05
HDA1YNL021W ATG16Q03818 150 aa8.5□□□□□ -1.05
HDA1YNL021W MOD5P07884 428 aa8.5□□□□□ -1.05
HDA1YNL021W BET3P36149 193 aa8.5□□□□□ -1.05
HDA1YNL021W YGR237CP50089 785 aa8.5□□□□□ -1.05
HDA1YNL021W CTR9P89105 1077 aa8.5□□□□□ -1.05
HDA1YNL021W DOP1Q03921 1698 aa8.49□□□□□ -1.05
HDA1YNL021W COBP00163 385 aa8.49□□□□□ -1.05
HDA1YNL021W FLP1P03870 423 aa8.49□□□□□ -1.05
HDA1YNL021W SEA4P38164 1038 aa8.49□□□□□ -1.05
HDA1YNL021W ULP1Q02724 621 aa8.49□□□□□ -1.05
HDA1YNL021W TIF6Q12522 245 aaKnown RBP8.49□□□□□ -1.05
HDA1YNL021W EMW1P42842 904 aaKnown RBP8.48□□□□□ -1.05
HDA1YNL021W TFB2Q02939 513 aa8.48□□□□□ -1.05
HDA1YNL021W ADI1Q03677 179 aa8.48□□□□□ -1.05
HDA1YNL021W VPS27P40343 622 aaKnown RBP8.48□□□□□ -1.05
HDA1YNL021W ISU1Q03020 165 aa8.48□□□□□ -1.05
HDA1YNL021W HIR1P32479 840 aa8.47□□□□□ -1.05
HDA1YNL021W GGA2P38817 585 aaKnown RBP8.47□□□□□ -1.05
HDA1YNL021W NTA1P40354 457 aa8.47□□□□□ -1.05
HDA1YNL021W NIT1P40447 199 aa8.47□□□□□ -1.05
HDA1YNL021W ATP4P05626 244 aa8.47□□□□□ -1.05
HDA1YNL021W HSP60P19882 572 aaKnown RBP8.47□□□□□ -1.05
HDA1YNL021W DUR3P33413 735 aa8.47□□□□□ -1.05
HDA1YNL021W RAD55P38953 406 aa8.47□□□□□ -1.05
HDA1YNL021W NOC2P39744 710 aaKnown RBP8.47□□□□□ -1.05
HDA1YNL021W RRN7P40992 514 aa8.47□□□□□ -1.05
HDA1YNL021W SPO75Q07798 868 aa8.47□□□□□ -1.05
HDA1YNL021W UTR2P32623 467 aa8.46□□□□□ -1.06
HDA1YNL021W NFU1P32860 256 aa8.46□□□□□ -1.06
HDA1YNL021W EAP1P36041 632 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms