RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W CUP1-2P0CX81 61 aa2.92□□□□□ -1.94
UBP15YMR304W GBP2P25555 427 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
UBP15YMR304W RTS1P38903 757 aa2.92□□□□□ -1.94
UBP15YMR304W SLN1P39928 1220 aaPredicted RBP2.92□□□□□ -1.94
UBP15YMR304W BRE2P43132 505 aa2.92□□□□□ -1.94
UBP15YMR304W YNR021WP53723 404 aaKnown RBP2.92□□□□□ -1.94
UBP15YMR304W YNL050CP53952 270 aa2.92□□□□□ -1.94
UBP15YMR304W MEH1Q02205 184 aa2.92□□□□□ -1.94
UBP15YMR304W YDR338CQ05497 695 aa2.92□□□□□ -1.94
UBP15YMR304W ABP140Q08641 628 aaKnown RBP2.92□□□□□ -1.94
UBP15YMR304W RAD59Q12223 238 aa2.92□□□□□ -1.94
UBP15YMR304W MMP1Q12372 583 aa2.92□□□□□ -1.94
UBP15YMR304W NUP145P49687 1317 aa2.91□□□□□ -1.94
UBP15YMR304W MCM1P11746 286 aa2.91□□□□□ -1.94
UBP15YMR304W NOP58Q12499 511 aaKnown RBP2.91□□□□□ -1.94
UBP15YMR304W CDC4P07834 779 aa2.91□□□□□ -1.94
UBP15YMR304W MPH1P40562 993 aa2.91□□□□□ -1.94
UBP15YMR304W LEM3P42838 414 aa2.91□□□□□ -1.94
UBP15YMR304W INP2Q03824 705 aa2.91□□□□□ -1.94
UBP15YMR304W CLP1Q08685 445 aaPredicted RBP2.91□□□□□ -1.94
UBP15YMR304W YDL206WQ12424 762 aa2.91□□□□□ -1.94
UBP15YMR304W ESS1P22696 170 aa2.91□□□□□ -1.94
UBP15YMR304W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
UBP15YMR304W HED1Q03937 162 aa2.91□□□□□ -1.94
UBP15YMR304W ATG26Q06321 1198 aa2.91□□□□□ -1.94
UBP15YMR304W YOR389WQ08912 624 aa2.91□□□□□ -1.94
UBP15YMR304W PHO84P25297 587 aaKnown RBP2.9□□□□□ -1.94
UBP15YMR304W BUD14P27637 709 aa2.9□□□□□ -1.94
UBP15YMR304W GAR1P28007 205 aaKnown RBP2.9□□□□□ -1.94
UBP15YMR304W RPC82P32349 654 aa2.9□□□□□ -1.94
UBP15YMR304W YKR018CP36114 725 aa2.9□□□□□ -1.94
UBP15YMR304W YHR131CP38835 850 aa2.9□□□□□ -1.94
UBP15YMR304W YGR117CP53270 476 aa2.9□□□□□ -1.94
UBP15YMR304W CIR2Q08822 631 aa2.9□□□□□ -1.94
UBP15YMR304W HMI1Q12039 706 aa2.9□□□□□ -1.94
UBP15YMR304W KIP2P28743 706 aa2.9□□□□□ -1.95
UBP15YMR304W HST3P53687 447 aa2.9□□□□□ -1.95
UBP15YMR304W DNL4Q08387 944 aaPredicted RBP2.9□□□□□ -1.95
UBP15YMR304W NOP14Q99207 810 aaKnown RBP2.9□□□□□ -1.95
UBP15YMR304W STE5P32917 917 aa2.9□□□□□ -1.95
UBP15YMR304W HCS1P34243 683 aa2.9□□□□□ -1.95
UBP15YMR304W FAA3P39002 694 aa2.9□□□□□ -1.95
UBP15YMR304W TIM54P47045 478 aa2.9□□□□□ -1.95
UBP15YMR304W PUS6P53294 404 aa2.9□□□□□ -1.95
UBP15YMR304W YDR341CQ05506 607 aaKnown RBP2.9□□□□□ -1.95
UBP15YMR304W ALR1Q08269 859 aa2.9□□□□□ -1.95
UBP15YMR304W SGT2Q12118 346 aaKnown RBP2.9□□□□□ -1.95
UBP15YMR304W FKS1P38631 1876 aaKnown RBP2.89□□□□□ -1.95
UBP15YMR304W SWI1P09547 1314 aa2.89□□□□□ -1.95
UBP15YMR304W SAC3P46674 1301 aa2.89□□□□□ -1.95
UBP15YMR304W TRM1P15565 570 aaKnown RBP2.89□□□□□ -1.95
UBP15YMR304W KDX1P36005 433 aa2.89□□□□□ -1.95
UBP15YMR304W VTC3Q02725 835 aa2.89□□□□□ -1.95
UBP15YMR304W NDL1Q06568 189 aa2.89□□□□□ -1.95
UBP15YMR304W UIP5P36137 443 aa2.89□□□□□ -1.95
UBP15YMR304W HXT10P43581 546 aa2.89□□□□□ -1.95
UBP15YMR304W ORM1P53224 222 aa2.89□□□□□ -1.95
UBP15YMR304W HST2P53686 357 aa2.89□□□□□ -1.95
UBP15YMR304W RNH1Q04740 348 aa2.89□□□□□ -1.95
UBP15YMR304W TY1B-AO13527 1196 aaKnown RBP2.89□□□□□ -1.95
UBP15YMR304W SRL3P36167 246 aa2.89□□□□□ -1.95
UBP15YMR304W MXR1P40029 184 aa2.89□□□□□ -1.95
UBP15YMR304W PKH3Q03306 898 aaPredicted RBP2.89□□□□□ -1.95
UBP15YMR304W ISA1Q07821 250 aaPredicted RBP2.89□□□□□ -1.95
UBP15YMR304W FLO1P32768 1537 aa2.89□□□□□ -1.95
UBP15YMR304W PDC1P06169 563 aaKnown RBP2.88□□□□□ -1.95
UBP15YMR304W RAD3P06839 778 aa2.88□□□□□ -1.95
UBP15YMR304W MOD5P07884 428 aa2.88□□□□□ -1.95
UBP15YMR304W TOA1P32773 286 aa2.88□□□□□ -1.95
UBP15YMR304W ASH1P34233 588 aa2.88□□□□□ -1.95
UBP15YMR304W SEC27P41811 889 aaKnown RBP2.88□□□□□ -1.95
UBP15YMR304W OYE3P41816 400 aaPredicted RBP2.88□□□□□ -1.95
UBP15YMR304W YJU3P28321 313 aa2.88□□□□□ -1.95
UBP15YMR304W SYN8P31377 255 aa2.88□□□□□ -1.95
UBP15YMR304W NPR3P38742 1146 aa2.88□□□□□ -1.95
UBP15YMR304W PXR1P53335 271 aaPredicted RBP2.88□□□□□ -1.95
UBP15YMR304W SYH1Q02875 849 aaKnown RBP2.88□□□□□ -1.95
UBP15YMR304W TOP1P04786 769 aa2.88□□□□□ -1.95
UBP15YMR304W HMG1P12683 1054 aa2.88□□□□□ -1.95
UBP15YMR304W ARG8P18544 423 aa2.88□□□□□ -1.95
UBP15YMR304W ESL2P36168 1195 aa2.88□□□□□ -1.95
UBP15YMR304W HOS4P40480 1083 aa2.88□□□□□ -1.95
UBP15YMR304W MCM6P53091 1017 aaKnown RBP2.88□□□□□ -1.95
UBP15YMR304W YAF9P53930 226 aa2.88□□□□□ -1.95
UBP15YMR304W PSF3Q12146 194 aa2.88□□□□□ -1.95
UBP15YMR304W RPL5P26321 297 aaKnown RBP2.87□□□□□ -1.95
UBP15YMR304W UBP12P39538 1254 aa2.87□□□□□ -1.95
UBP15YMR304W AIM20P40451 204 aa2.87□□□□□ -1.95
UBP15YMR304W CSN12P47130 423 aa2.87□□□□□ -1.95
UBP15YMR304W IRC3Q06683 689 aa2.87□□□□□ -1.95
UBP15YMR304W YVC1Q12324 675 aa2.87□□□□□ -1.95
UBP15YMR304W RPO41P13433 1351 aaKnown RBP2.87□□□□□ -1.95
UBP15YMR304W NET1P47035 1189 aa2.87□□□□□ -1.95
UBP15YMR304W SMC3P47037 1230 aa2.87□□□□□ -1.95
UBP15YMR304W RPA14P50106 137 aa2.87□□□□□ -1.95
UBP15YMR304W ESBP6P53918 673 aa2.87□□□□□ -1.95
UBP15YMR304W CAB1Q04430 367 aa2.87□□□□□ -1.95
UBP15YMR304W MET32Q12041 191 aa2.87□□□□□ -1.95
UBP15YMR304W PHM7Q12252 991 aa2.87□□□□□ -1.95
UBP15YMR304W RPL40AP0CH08 128 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms