RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C PEX28P38848 579 aa7.03□□□□□ -1.28
BLS1YLR408C UTP22P53254 1237 aaPredicted RBP7.03□□□□□ -1.28
BLS1YLR408C THI72Q08579 599 aa7.03□□□□□ -1.28
BLS1YLR408C SEC23P15303 768 aaKnown RBP7.02□□□□□ -1.29
BLS1YLR408C NAP1P25293 417 aaKnown RBP7.02□□□□□ -1.29
BLS1YLR408C MSH3P25336 1018 aa7.02□□□□□ -1.29
BLS1YLR408C YKL077WP36081 392 aa7.02□□□□□ -1.29
BLS1YLR408C RDH54P38086 958 aa7.02□□□□□ -1.29
BLS1YLR408C RSM26P47141 266 aa7.02□□□□□ -1.29
BLS1YLR408C GCV1P48015 400 aa7.02□□□□□ -1.29
BLS1YLR408C YGL140CP53120 1219 aa7.02□□□□□ -1.29
BLS1YLR408C YNR014WP53719 212 aa7.02□□□□□ -1.29
BLS1YLR408C DSE4P53753 1117 aa7.02□□□□□ -1.29
BLS1YLR408C ELG1Q12050 791 aa7.02□□□□□ -1.29
BLS1YLR408C TY1A-LR4P0C2I8 440 aaKnown RBP7.01□□□□□ -1.29
BLS1YLR408C TY1A-DR6P0CX70 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-ER1P0CX71 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-LR2P0CX72 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-PLP0CX73 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-JR1P0CX74 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-LR3P0CX75 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-ML2P0CX76 440 aa7.01□□□□□ -1.29
BLS1YLR408C SQT1P35184 431 aa7.01□□□□□ -1.29
BLS1YLR408C RRM3P38766 723 aa7.01□□□□□ -1.29
BLS1YLR408C MEC3Q02574 474 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-GR1Q12085 440 aa7.01□□□□□ -1.29
BLS1YLR408C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.01□□□□□ -1.29
BLS1YLR408C TY1A-OLQ92392 440 aaKnown RBP7.01□□□□□ -1.29
BLS1YLR408C TAF13P11747 167 aa7□□□□□ -1.29
BLS1YLR408C MDJ1P35191 511 aa7□□□□□ -1.29
BLS1YLR408C MNR2P35724 969 aa7□□□□□ -1.29
BLS1YLR408C BUD9P53226 547 aa7□□□□□ -1.29
BLS1YLR408C PEX13P80667 386 aa7□□□□□ -1.29
BLS1YLR408C TDA6Q06466 467 aa7□□□□□ -1.29
BLS1YLR408C HEM13P11353 328 aaKnown RBP6.99□□□□□ -1.29
BLS1YLR408C VMA4P22203 233 aaKnown RBP6.99□□□□□ -1.29
BLS1YLR408C MAE1P36013 669 aaKnown RBP6.99□□□□□ -1.29
BLS1YLR408C MET10P39692 1035 aa6.99□□□□□ -1.29
BLS1YLR408C NSG2P53898 299 aa6.99□□□□□ -1.29
BLS1YLR408C FAR11P53917 953 aa6.99□□□□□ -1.29
BLS1YLR408C ERS1P17261 260 aa6.98□□□□□ -1.29
BLS1YLR408C SFA1P32771 386 aa6.98□□□□□ -1.29
BLS1YLR408C NEM1P38757 446 aa6.98□□□□□ -1.29
BLS1YLR408C GNP1P48813 663 aa6.98□□□□□ -1.29
BLS1YLR408C TY1A-NL1Q12391 440 aaKnown RBP6.98□□□□□ -1.29
BLS1YLR408C SLS1P42900 643 aa6.97□□□□□ -1.29
BLS1YLR408C YLL054CQ12244 843 aa6.97□□□□□ -1.29
BLS1YLR408C PHM7Q12252 991 aa6.97□□□□□ -1.29
BLS1YLR408C AI3P03877 415 aa6.96□□□□□ -1.3
BLS1YLR408C GCR1P07261 785 aa6.96□□□□□ -1.3
BLS1YLR408C PET112P33893 541 aa6.96□□□□□ -1.3
BLS1YLR408C ICP55P40051 511 aa6.96□□□□□ -1.3
BLS1YLR408C UTP5Q04177 643 aaKnown RBP6.96□□□□□ -1.3
BLS1YLR408C JIP5Q06214 492 aaPredicted RBP6.96□□□□□ -1.3
BLS1YLR408C PIN2Q12057 282 aa6.96□□□□□ -1.3
BLS1YLR408C DUT1P33317 147 aa6.95□□□□□ -1.3
BLS1YLR408C XKS1P42826 600 aa6.95□□□□□ -1.3
BLS1YLR408C MTR4P47047 1073 aaKnown RBP6.95□□□□□ -1.3
BLS1YLR408C VPS16Q03308 798 aa6.95□□□□□ -1.3
BLS1YLR408C RTT10Q08924 1013 aa6.95□□□□□ -1.3
BLS1YLR408C CDC34P14682 295 aa6.94□□□□□ -1.3
BLS1YLR408C CLN2P20438 545 aa6.94□□□□□ -1.3
BLS1YLR408C YCK2P23292 546 aaKnown RBP6.94□□□□□ -1.3
BLS1YLR408C REI1P38344 393 aaPredicted RBP6.94□□□□□ -1.3
BLS1YLR408C ENT3P47160 408 aa6.94□□□□□ -1.3
BLS1YLR408C KIP3P53086 805 aaKnown RBP6.94□□□□□ -1.3
BLS1YLR408C NCE103P53615 221 aa6.94□□□□□ -1.3
BLS1YLR408C HDA2Q06629 674 aa6.94□□□□□ -1.3
BLS1YLR408C GAS5Q08193 484 aa6.94□□□□□ -1.3
BLS1YLR408C YDR215CQ12240 137 aa6.94□□□□□ -1.3
BLS1YLR408C HXT13P39924 564 aa6.93□□□□□ -1.3
BLS1YLR408C HXT17P53631 564 aa6.93□□□□□ -1.3
BLS1YLR408C SIW14P53965 281 aa6.93□□□□□ -1.3
BLS1YLR408C HXT15P54854 567 aa6.93□□□□□ -1.3
BLS1YLR408C MAG2Q06436 670 aaKnown RBP6.93□□□□□ -1.3
BLS1YLR408C YOR223WQ12015 292 aa6.93□□□□□ -1.3
BLS1YLR408C REC8Q12188 680 aa6.93□□□□□ -1.3
BLS1YLR408C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
BLS1YLR408C SKN7P38889 622 aa6.92□□□□□ -1.3
BLS1YLR408C YMR187CQ03236 431 aa6.92□□□□□ -1.3
BLS1YLR408C YMR074CQ04773 145 aa6.92□□□□□ -1.3
BLS1YLR408C RSC6P25632 483 aa6.91□□□□□ -1.3
BLS1YLR408C ADD66P36040 267 aa6.91□□□□□ -1.3
BLS1YLR408C MAD1P40957 749 aa6.91□□□□□ -1.3
BLS1YLR408C PRY1P47032 299 aa6.91□□□□□ -1.3
BLS1YLR408C ARI1P53111 347 aaKnown RBP6.91□□□□□ -1.3
BLS1YLR408C RKM2Q03942 479 aa6.91□□□□□ -1.3
BLS1YLR408C YPR053CQ6Q5F3 151 aa6.91□□□□□ -1.3
BLS1YLR408C SLN1P39928 1220 aaPredicted RBP6.9□□□□□ -1.3
BLS1YLR408C YGR045CP53229 120 aa6.9□□□□□ -1.3
BLS1YLR408C EST2Q06163 884 aa6.9□□□□□ -1.3
BLS1YLR408C MRL1Q06815 381 aa6.9□□□□□ -1.3
BLS1YLR408C TMA46Q12000 345 aaKnown RBP6.9□□□□□ -1.3
BLS1YLR408C YGR053CP53234 283 aa6.89□□□□□ -1.31
BLS1YLR408C ALG6Q12001 544 aaKnown RBP6.89□□□□□ -1.31
BLS1YLR408C DOT1Q04089 582 aaKnown RBP6.88□□□□□ -1.31
BLS1YLR408C RAD27P26793 382 aa6.87□□□□□ -1.31
BLS1YLR408C YAR028WP39548 234 aa6.87□□□□□ -1.31
BLS1YLR408C SPO74P45819 413 aa6.87□□□□□ -1.31
BLS1YLR408C ROD1Q02805 837 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms