RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS34	YLR240W	HXK1	P04806	485 aa	Known RBP	3.02	□□□□□ -1.93
VPS34	YLR240W	SLN1	P39928	1220 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS34	YLR240W	GCV1	P48015	400 aa		3.02	□□□□□ -1.93
VPS34	YLR240W	YGR122W	P53272	402 aa		3.02	□□□□□ -1.93
VPS34	YLR240W	SPT6	P23615	1451 aa	Known RBP	3.01	□□□□□ -1.93
VPS34	YLR240W	ERS1	P17261	260 aa		3.01	□□□□□ -1.93
VPS34	YLR240W	UGA4	P32837	571 aa		3.01	□□□□□ -1.93
VPS34	YLR240W	MAE1	P36013	669 aa	Known RBP	3.01	□□□□□ -1.93
VPS34	YLR240W	NOG1	Q02892	647 aa	Known RBP	3.01	□□□□□ -1.93
VPS34	YLR240W	TAT1	P38085	619 aa		3.01	□□□□□ -1.93
VPS34	YLR240W	ARI1	P53111	347 aa	Known RBP	3.01	□□□□□ -1.93
VPS34	YLR240W	FAR11	P53917	953 aa		3.01	□□□□□ -1.93
VPS34	YLR240W	ULP1	Q02724	621 aa		3.01	□□□□□ -1.93
VPS34	YLR240W	YPL109C	Q02981	657 aa		3.01	□□□□□ -1.93
VPS34	YLR240W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3	□□□□□ -1.93
VPS34	YLR240W	TY1A-DR6	P0CX70	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-ER1	P0CX71	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-LR2	P0CX72	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-PL	P0CX73	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-JR1	P0CX74	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-LR3	P0CX75	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-ML2	P0CX76	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	EXO5	P38289	585 aa		3	□□□□□ -1.93
VPS34	YLR240W	SHU2	P38957	223 aa		3	□□□□□ -1.93
VPS34	YLR240W	CCT8	P47079	568 aa	Known RBP	3	□□□□□ -1.93
VPS34	YLR240W	UTP22	P53254	1237 aa	Predicted RBP	3	□□□□□ -1.93
VPS34	YLR240W	TY1A-GR1	Q12085	440 aa		3	□□□□□ -1.93
VPS34	YLR240W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3	□□□□□ -1.93
VPS34	YLR240W	TY1A-OL	Q92392	440 aa	Known RBP	3	□□□□□ -1.93
VPS34	YLR240W	SWR1	Q05471	1514 aa		3	□□□□□ -1.93
VPS34	YLR240W	FYV10	P40492	516 aa		3	□□□□□ -1.93
VPS34	YLR240W	ADI1	Q03677	179 aa		3	□□□□□ -1.93
VPS34	YLR240W	RSC6	P25632	483 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	PGM1	P33401	570 aa	Known RBP	2.99	□□□□□ -1.93
VPS34	YLR240W	ARL1	P38116	183 aa	Known RBP	2.99	□□□□□ -1.93
VPS34	YLR240W	RSM26	P47141	266 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	MEC3	Q02574	474 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	MTC5	Q03897	1148 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	MCA1	Q08601	432 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	CYC8	P14922	966 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	SQT1	P35184	431 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	NCE103	P53615	221 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	YOR223W	Q12015	292 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	MCD1	Q12158	566 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	REC8	Q12188	680 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	YLL054C	Q12244	843 aa		2.99	□□□□□ -1.93
VPS34	YLR240W	RAD2	P07276	1031 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	MSH3	P25336	1018 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	SEC8	P32855	1065 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	YKL077W	P36081	392 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	KIP3	P53086	805 aa	Known RBP	2.98	□□□□□ -1.93
VPS34	YLR240W	YMR074C	Q04773	145 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	PRE9	P23638	258 aa	Known RBP	2.98	□□□□□ -1.93
VPS34	YLR240W	MCM2	P29469	868 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	RPS26A	P39938	119 aa	Known RBP	2.98	□□□□□ -1.93
VPS34	YLR240W	RPS26B	P39939	119 aa	Known RBP	2.98	□□□□□ -1.93
VPS34	YLR240W	LSB3	P43603	459 aa	Known RBP	2.98	□□□□□ -1.93
VPS34	YLR240W	SPR28	Q04921	423 aa		2.98	□□□□□ -1.93
VPS34	YLR240W	THO2	P53552	1597 aa	Known RBP	2.98	□□□□□ -1.93
VPS34	YLR240W	SEC23	P15303	768 aa	Known RBP	2.97	□□□□□ -1.93
VPS34	YLR240W	VMA4	P22203	233 aa	Known RBP	2.97	□□□□□ -1.93
VPS34	YLR240W	SIN3	P22579	1536 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	NEM1	P38757	446 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	PEX28	P38848	579 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	PIC2	P40035	300 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	PEX13	P80667	386 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	YPL034W	Q03083	165 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	RMD1	Q03441	430 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	ESF1	Q06344	628 aa	Known RBP	2.97	□□□□□ -1.93
VPS34	YLR240W	HIR3	P47171	1648 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	REI1	P38344	393 aa	Predicted RBP	2.97	□□□□□ -1.93
VPS34	YLR240W	MRPS18	P42847	217 aa		2.97	□□□□□ -1.93
VPS34	YLR240W	OYE2	Q03558	400 aa	Known RBP	2.97	□□□□□ -1.93
VPS34	YLR240W	TAF13	P11747	167 aa		2.96	□□□□□ -1.94
VPS34	YLR240W	RDH54	P38086	958 aa		2.96	□□□□□ -1.94
VPS34	YLR240W	YGL140C	P53120	1219 aa		2.96	□□□□□ -1.94
VPS34	YLR240W	DOT1	Q04089	582 aa	Known RBP	2.96	□□□□□ -1.94
VPS34	YLR240W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
VPS34	YLR240W	SAF1	P38352	637 aa		2.96	□□□□□ -1.94
VPS34	YLR240W	MTR4	P47047	1073 aa	Known RBP	2.96	□□□□□ -1.94
VPS34	YLR240W	HEM13	P11353	328 aa	Known RBP	2.95	□□□□□ -1.94
VPS34	YLR240W	AKR1	P39010	764 aa		2.95	□□□□□ -1.94
VPS34	YLR240W	SLS1	P42900	643 aa		2.95	□□□□□ -1.94
VPS34	YLR240W	UTP5	Q04177	643 aa	Known RBP	2.95	□□□□□ -1.94
VPS34	YLR240W	ALG6	Q12001	544 aa	Known RBP	2.95	□□□□□ -1.94
VPS34	YLR240W	KOG1	P38873	1557 aa		2.95	□□□□□ -1.94
VPS34	YLR240W	COQ2	P32378	372 aa		2.95	□□□□□ -1.94
VPS34	YLR240W	GPT2	P36148	743 aa		2.95	□□□□□ -1.94
VPS34	YLR240W	SNU71	P53207	620 aa	Known RBP	2.95	□□□□□ -1.94
VPS34	YLR240W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
VPS34	YLR240W	XKS1	P42826	600 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	SPO74	P45819	413 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	RKM2	Q03942	479 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	YLR122C	Q12312	125 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	ENT3	P47160	408 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	GNP1	P48813	663 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	YGR045C	P53229	120 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	HDA2	Q06629	674 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	GIC2	Q06648	383 aa		2.94	□□□□□ -1.94
VPS34	YLR240W	NAM7	P30771	971 aa	Known RBP	2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms