RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCK1	YKR097W	SOG2	Q08817	791 aa		4.3	□□□□□ -1.72
PCK1	YKR097W	SLN1	P39928	1220 aa	Predicted RBP	4.29	□□□□□ -1.72
PCK1	YKR097W	VPS16	Q03308	798 aa		4.29	□□□□□ -1.72
PCK1	YKR097W	PIN2	Q12057	282 aa		4.29	□□□□□ -1.72
PCK1	YKR097W	MNR2	P35724	969 aa		4.29	□□□□□ -1.72
PCK1	YKR097W	LSB6	P42951	607 aa		4.29	□□□□□ -1.72
PCK1	YKR097W	PRY1	P47032	299 aa		4.29	□□□□□ -1.72
PCK1	YKR097W	NOG1	Q02892	647 aa	Known RBP	4.29	□□□□□ -1.72
PCK1	YKR097W	PET112	P33893	541 aa		4.28	□□□□□ -1.72
PCK1	YKR097W	RRM3	P38766	723 aa		4.28	□□□□□ -1.72
PCK1	YKR097W	GUP1	P53154	560 aa		4.28	□□□□□ -1.72
PCK1	YKR097W	BUD9	P53226	547 aa		4.28	□□□□□ -1.72
PCK1	YKR097W	SFA1	P32771	386 aa		4.27	□□□□□ -1.73
PCK1	YKR097W	LEM3	P42838	414 aa		4.27	□□□□□ -1.73
PCK1	YKR097W	YPL034W	Q03083	165 aa		4.27	□□□□□ -1.73
PCK1	YKR097W	HTS1	P07263	546 aa	Known RBP	4.26	□□□□□ -1.73
PCK1	YKR097W	HEM13	P11353	328 aa	Known RBP	4.26	□□□□□ -1.73
PCK1	YKR097W	CLN2	P20438	545 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	GIP2	P40036	548 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	MAD1	P40957	749 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	SOK2	P53438	785 aa	Predicted RBP	4.26	□□□□□ -1.73
PCK1	YKR097W	AI3	P03877	415 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	GCR1	P07261	785 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	SAC7	P17121	654 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	MSH3	P25336	1018 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	RSC6	P25632	483 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	PEX28	P38848	579 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	FET4	P40988	552 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	YGL140C	P53120	1219 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	DSE4	P53753	1117 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	MCA1	Q08601	432 aa		4.26	□□□□□ -1.73
PCK1	YKR097W	CDC34	P14682	295 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	DUT1	P33317	147 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	SQT1	P35184	431 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	EXO5	P38289	585 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	VAC8	P39968	578 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	RSM26	P47141	266 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	ALD6	P54115	500 aa	Known RBP	4.25	□□□□□ -1.73
PCK1	YKR097W	ORC1	P54784	914 aa	Predicted RBP	4.25	□□□□□ -1.73
PCK1	YKR097W	PEX13	P80667	386 aa		4.25	□□□□□ -1.73
PCK1	YKR097W	HAS1	Q03532	505 aa	Known RBP	4.25	□□□□□ -1.73
PCK1	YKR097W	TY4B-P	A0A0B7P3V8	1104 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	SEC23	P15303	768 aa	Known RBP	4.24	□□□□□ -1.73
PCK1	YKR097W	COQ2	P32378	372 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	RDH54	P38086	958 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	SHU2	P38957	223 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	TED1	P40533	473 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	GNP1	P48813	663 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	TY4A-H	Q6Q5P6	413 aa		4.24	□□□□□ -1.73
PCK1	YKR097W	OCA5	P38738	679 aa		4.23	□□□□□ -1.73
PCK1	YKR097W	NEO1	P40527	1151 aa		4.23	□□□□□ -1.73
PCK1	YKR097W	XKS1	P42826	600 aa		4.23	□□□□□ -1.73
PCK1	YKR097W	ARI1	P53111	347 aa	Known RBP	4.23	□□□□□ -1.73
PCK1	YKR097W	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73
PCK1	YKR097W	RTT10	Q08924	1013 aa		4.23	□□□□□ -1.73
PCK1	YKR097W	YIG1	Q08956	461 aa		4.23	□□□□□ -1.73
PCK1	YKR097W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-DR6	P0CX70	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-ER1	P0CX71	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-LR2	P0CX72	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-PL	P0CX73	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-JR1	P0CX74	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-LR3	P0CX75	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-ML2	P0CX76	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TAF13	P11747	167 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	VMA4	P22203	233 aa	Known RBP	4.22	□□□□□ -1.73
PCK1	YKR097W	YKL077W	P36081	392 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	POL5	P39985	1022 aa	Known RBP	4.22	□□□□□ -1.73
PCK1	YKR097W	UTP22	P53254	1237 aa	Predicted RBP	4.22	□□□□□ -1.73
PCK1	YKR097W	HDA2	Q06629	674 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-GR1	Q12085	440 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.22	□□□□□ -1.73
PCK1	YKR097W	TY1A-OL	Q92392	440 aa	Known RBP	4.22	□□□□□ -1.73
PCK1	YKR097W	PAN5	P38787	379 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	HXT13	P39924	564 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	NNF1	P47149	201 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	HXT17	P53631	564 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	HXT15	P54854	567 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	SPO71	Q03868	1245 aa		4.22	□□□□□ -1.73
PCK1	YKR097W	SLS1	P42900	643 aa		4.21	□□□□□ -1.74
PCK1	YKR097W	FAA4	P47912	694 aa	Known RBP	4.21	□□□□□ -1.74
PCK1	YKR097W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PCK1	YKR097W	GDE1	Q02979	1223 aa		4.21	□□□□□ -1.74
PCK1	YKR097W	MRL1	Q06815	381 aa		4.21	□□□□□ -1.74
PCK1	YKR097W	GAS5	Q08193	484 aa		4.21	□□□□□ -1.74
PCK1	YKR097W	REC8	Q12188	680 aa		4.21	□□□□□ -1.74
PCK1	YKR097W	MAC1	P35192	417 aa		4.2	□□□□□ -1.74
PCK1	YKR097W	MAE1	P36013	669 aa	Known RBP	4.2	□□□□□ -1.74
PCK1	YKR097W	ARL1	P38116	183 aa	Known RBP	4.2	□□□□□ -1.74
PCK1	YKR097W	CWC24	P53769	259 aa		4.2	□□□□□ -1.74
PCK1	YKR097W	MEC3	Q02574	474 aa		4.2	□□□□□ -1.74
PCK1	YKR097W	UTP5	Q04177	643 aa	Known RBP	4.2	□□□□□ -1.74
PCK1	YKR097W	TMA46	Q12000	345 aa	Known RBP	4.2	□□□□□ -1.74
PCK1	YKR097W	SSF2	Q12153	453 aa	Predicted RBP	4.2	□□□□□ -1.74
PCK1	YKR097W	NEM1	P38757	446 aa		4.19	□□□□□ -1.74
PCK1	YKR097W	GCV1	P48015	400 aa		4.19	□□□□□ -1.74
PCK1	YKR097W	SIW14	P53965	281 aa		4.19	□□□□□ -1.74
PCK1	YKR097W	EEB1	Q02891	456 aa		4.19	□□□□□ -1.74
PCK1	YKR097W	KAE1	P36132	386 aa		4.19	□□□□□ -1.74
PCK1	YKR097W	ENT3	P47160	408 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms