RNA–Protein interactions for RNA: YKR068C

BET3, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene BET3, Length 582 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BET3	YKR068C	RPS4B	P0CX36	261 aa	Known RBP	5	□□□□□ -1.61
BET3	YKR068C	NFS1	P25374	497 aa		5	□□□□□ -1.61
BET3	YKR068C	GCV1	P48015	400 aa		5	□□□□□ -1.61
BET3	YKR068C	SWR1	Q05471	1514 aa		5	□□□□□ -1.61
BET3	YKR068C	SSA4	P22202	642 aa	Known RBP	4.99	□□□□□ -1.61
BET3	YKR068C	MRPL22	P53881	309 aa		4.99	□□□□□ -1.61
BET3	YKR068C	FUR4	P05316	633 aa	Known RBP	4.98	□□□□□ -1.61
BET3	YKR068C	NOB1	Q08444	459 aa	Known RBP	4.98	□□□□□ -1.61
BET3	YKR068C	LPX1	Q12405	387 aa	Known RBP	4.97	□□□□□ -1.61
BET3	YKR068C	SOD2	P00447	233 aa		4.96	□□□□□ -1.62
BET3	YKR068C	PRO1	P32264	428 aa		4.96	□□□□□ -1.62
BET3	YKR068C	ABZ1	P37254	787 aa	Predicted RBP	4.96	□□□□□ -1.62
BET3	YKR068C	ALT1	P52893	592 aa		4.96	□□□□□ -1.62
BET3	YKR068C	LSO1	Q3E827	93 aa		4.96	□□□□□ -1.62
BET3	YKR068C	RLF2	Q12495	606 aa		4.95	□□□□□ -1.62
BET3	YKR068C	PEX7	P39108	375 aa		4.94	□□□□□ -1.62
BET3	YKR068C	YIG1	Q08956	461 aa		4.94	□□□□□ -1.62
BET3	YKR068C	YVC1	Q12324	675 aa		4.94	□□□□□ -1.62
BET3	YKR068C	PNS1	Q12412	539 aa		4.94	□□□□□ -1.62
BET3	YKR068C	TUB2	P02557	457 aa	Known RBP	4.93	□□□□□ -1.62
BET3	YKR068C	TOD6	P34219	525 aa		4.93	□□□□□ -1.62
BET3	YKR068C	YPT53	P36019	220 aa		4.93	□□□□□ -1.62
BET3	YKR068C	ECM2	P38241	364 aa	Known RBP	4.93	□□□□□ -1.62
BET3	YKR068C	MSH4	P40965	878 aa	Predicted RBP	4.93	□□□□□ -1.62
BET3	YKR068C	BOL3	P39724	118 aa		4.92	□□□□□ -1.62
BET3	YKR068C	CTR9	P89105	1077 aa		4.91	□□□□□ -1.62
BET3	YKR068C	YLR358C	O13565	187 aa		4.9	□□□□□ -1.63
BET3	YKR068C	PTC7	P38797	343 aa		4.9	□□□□□ -1.63
BET3	YKR068C	MEC3	Q02574	474 aa		4.9	□□□□□ -1.63
BET3	YKR068C	CLU1	Q03690	1277 aa	Known RBP	4.9	□□□□□ -1.63
BET3	YKR068C	ALG6	Q12001	544 aa	Known RBP	4.9	□□□□□ -1.63
BET3	YKR068C	YDL177C	Q12257	170 aa		4.9	□□□□□ -1.63
BET3	YKR068C	HTS1	P07263	546 aa	Known RBP	4.89	□□□□□ -1.63
BET3	YKR068C	NPR1	P22211	790 aa		4.89	□□□□□ -1.63
BET3	YKR068C	EAR1	Q03212	550 aa		4.89	□□□□□ -1.63
BET3	YKR068C	COB	P00163	385 aa		4.88	□□□□□ -1.63
BET3	YKR068C	RPS13	P05756	151 aa	Known RBP	4.88	□□□□□ -1.63
BET3	YKR068C	SMY2	P32909	740 aa	Known RBP	4.88	□□□□□ -1.63
BET3	YKR068C	YPL277C	Q08989	487 aa		4.88	□□□□□ -1.63
BET3	YKR068C	CMR1	Q12510	522 aa	Known RBP	4.88	□□□□□ -1.63
BET3	YKR068C	SPA2	P23201	1466 aa	Known RBP	4.88	□□□□□ -1.63
BET3	YKR068C	REI1	P38344	393 aa	Predicted RBP	4.87	□□□□□ -1.63
BET3	YKR068C	RIM11	P38615	370 aa		4.87	□□□□□ -1.63
BET3	YKR068C	FOL2	P51601	243 aa	Known RBP	4.87	□□□□□ -1.63
BET3	YKR068C	SNO2	P53823	222 aa		4.87	□□□□□ -1.63
BET3	YKR068C	NNK1	P36003	928 aa		4.86	□□□□□ -1.63
BET3	YKR068C	SHM2	P37291	469 aa	Known RBP	4.86	□□□□□ -1.63
BET3	YKR068C	GLO3	P38682	493 aa	Known RBP	4.86	□□□□□ -1.63
BET3	YKR068C	ETP1	P38748	585 aa	Known RBP	4.86	□□□□□ -1.63
BET3	YKR068C	GTS1	P40956	396 aa		4.86	□□□□□ -1.63
BET3	YKR068C	CTS1	P29029	562 aa		4.85	□□□□□ -1.63
BET3	YKR068C	UTP22	P53254	1237 aa	Predicted RBP	4.85	□□□□□ -1.63
BET3	YKR068C	UFD2	P54860	961 aa		4.85	□□□□□ -1.63
BET3	YKR068C	ELA1	P53861	379 aa	Predicted RBP	4.84	□□□□□ -1.63
BET3	YKR068C	DUR3	P33413	735 aa		4.83	□□□□□ -1.64
BET3	YKR068C	RSC4	Q02206	625 aa		4.83	□□□□□ -1.64
BET3	YKR068C	AVO1	Q08236	1176 aa		4.83	□□□□□ -1.64
BET3	YKR068C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
BET3	YKR068C	PRP5	P21372	849 aa	Predicted RBP	4.82	□□□□□ -1.64
BET3	YKR068C	QDR1	P40475	563 aa		4.82	□□□□□ -1.64
BET3	YKR068C	KAR5	Q04746	504 aa		4.82	□□□□□ -1.64
BET3	YKR068C	YGR045C	P53229	120 aa		4.81	□□□□□ -1.64
BET3	YKR068C	RPL34A	P87262	121 aa	Predicted RBP	4.81	□□□□□ -1.64
BET3	YKR068C	SUB2	Q07478	446 aa	Known RBP	4.81	□□□□□ -1.64
BET3	YKR068C	ARL1	P38116	183 aa	Known RBP	4.8	□□□□□ -1.64
BET3	YKR068C	BSC2	Q05611	235 aa		4.8	□□□□□ -1.64
BET3	YKR068C	PUS7	Q08647	676 aa	Known RBP	4.79	□□□□□ -1.64
BET3	YKR068C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-DR6	P0CX70	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-ER1	P0CX71	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-LR2	P0CX72	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-PL	P0CX73	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-JR1	P0CX74	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-LR3	P0CX75	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-ML2	P0CX76	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
BET3	YKR068C	YNL011C	P53980	444 aa		4.78	□□□□□ -1.64
BET3	YKR068C	PMT7	Q06644	662 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-GR1	Q12085	440 aa		4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.78	□□□□□ -1.64
BET3	YKR068C	TY1A-OL	Q92392	440 aa	Known RBP	4.78	□□□□□ -1.64
BET3	YKR068C	TY1B-DR4	Q07793	1604 aa		4.77	□□□□□ -1.65
BET3	YKR068C	MCM5	P29496	775 aa	Known RBP	4.77	□□□□□ -1.65
BET3	YKR068C	TAT2	P38967	592 aa		4.77	□□□□□ -1.65
BET3	YKR068C	YAF9	P53930	226 aa		4.77	□□□□□ -1.65
BET3	YKR068C	TPP1	Q03796	238 aa		4.77	□□□□□ -1.65
BET3	YKR068C	TCB3	Q03640	1545 aa	Known RBP	4.77	□□□□□ -1.65
BET3	YKR068C	TRM2	P33753	639 aa		4.76	□□□□□ -1.65
BET3	YKR068C	SAP155	P43612	1002 aa		4.76	□□□□□ -1.65
BET3	YKR068C	NUT1	P53114	1132 aa		4.76	□□□□□ -1.65
BET3	YKR068C	ENV11	P53246	860 aa		4.76	□□□□□ -1.65
BET3	YKR068C	YOR352W	Q08816	343 aa		4.76	□□□□□ -1.65
BET3	YKR068C	PUS9	Q12069	462 aa		4.76	□□□□□ -1.65
BET3	YKR068C	FLP1	P03870	423 aa		4.75	□□□□□ -1.65
BET3	YKR068C	SSA1	P10591	642 aa	Known RBP	4.75	□□□□□ -1.65
BET3	YKR068C	MDL2	P33311	773 aa		4.75	□□□□□ -1.65
BET3	YKR068C	YKL077W	P36081	392 aa		4.75	□□□□□ -1.65
BET3	YKR068C	YHL012W	P38709	493 aa		4.75	□□□□□ -1.65
BET3	YKR068C	ATG1	P53104	897 aa		4.75	□□□□□ -1.65
BET3	YKR068C	TRS120	Q04183	1289 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms