RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W RPL40BP0CH09 128 aaKnown RBP2.81□□□□□ -1.96
NUP100YKL068W ERR1P0CX10 437 aa2.81□□□□□ -1.96
NUP100YKL068W ERR2P0CX11 437 aa2.81□□□□□ -1.96
NUP100YKL068W HAP4P14064 554 aa2.81□□□□□ -1.96
NUP100YKL068W YFL040WP43562 540 aa2.81□□□□□ -1.96
NUP100YKL068W IES1P43579 692 aa2.81□□□□□ -1.96
NUP100YKL068W YJR120WP47157 116 aa2.81□□□□□ -1.96
NUP100YKL068W YNR029CP53729 429 aaKnown RBP2.81□□□□□ -1.96
NUP100YKL068W ISU2Q12056 156 aa2.81□□□□□ -1.96
NUP100YKL068W CDC11P32458 415 aa2.8□□□□□ -1.96
NUP100YKL068W BDP1P46678 594 aa2.8□□□□□ -1.96
NUP100YKL068W DAS1P47005 663 aa2.8□□□□□ -1.96
NUP100YKL068W STR2P47164 639 aa2.8□□□□□ -1.96
NUP100YKL068W PUS6P53294 404 aa2.8□□□□□ -1.96
NUP100YKL068W GDE1Q02979 1223 aa2.8□□□□□ -1.96
NUP100YKL068W ATG16Q03818 150 aa2.8□□□□□ -1.96
NUP100YKL068W TRS120Q04183 1289 aa2.8□□□□□ -1.96
NUP100YKL068W SLX4Q12098 748 aa2.8□□□□□ -1.96
NUP100YKL068W YRR1Q12172 810 aa2.8□□□□□ -1.96
NUP100YKL068W MFT1P33441 392 aaKnown RBP2.8□□□□□ -1.96
NUP100YKL068W SOH1P38633 127 aa2.8□□□□□ -1.96
NUP100YKL068W VID27P40157 782 aa2.8□□□□□ -1.96
NUP100YKL068W FAA4P47912 694 aaKnown RBP2.8□□□□□ -1.96
NUP100YKL068W CWC22P53333 577 aaKnown RBP2.8□□□□□ -1.96
NUP100YKL068W TOS4Q06266 489 aa2.8□□□□□ -1.96
NUP100YKL068W FRA1Q07825 749 aa2.8□□□□□ -1.96
NUP100YKL068W YLR125WQ12138 136 aa2.8□□□□□ -1.96
NUP100YKL068W NYV1Q12255 253 aa2.8□□□□□ -1.96
NUP100YKL068W NOP14Q99207 810 aaKnown RBP2.8□□□□□ -1.96
NUP100YKL068W SPT2P06843 333 aaPredicted RBP2.79□□□□□ -1.96
NUP100YKL068W NFU1P32860 256 aa2.79□□□□□ -1.96
NUP100YKL068W YKL222CP35995 705 aa2.79□□□□□ -1.96
NUP100YKL068W YHR131CP38835 850 aa2.79□□□□□ -1.96
NUP100YKL068W NIT1P40447 199 aa2.79□□□□□ -1.96
NUP100YKL068W NMA111P53920 997 aa2.79□□□□□ -1.96
NUP100YKL068W RMD1Q03441 430 aa2.79□□□□□ -1.96
NUP100YKL068W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
NUP100YKL068W SND1Q04007 877 aa2.79□□□□□ -1.96
NUP100YKL068W TDA5Q06417 326 aaKnown RBP2.79□□□□□ -1.96
NUP100YKL068W TMA17Q12513 150 aa2.79□□□□□ -1.96
NUP100YKL068W KEX2P13134 814 aa2.79□□□□□ -1.96
NUP100YKL068W CYC8P14922 966 aa2.79□□□□□ -1.96
NUP100YKL068W MRC1P25588 1096 aa2.79□□□□□ -1.96
NUP100YKL068W YIL089WP40500 205 aa2.79□□□□□ -1.96
NUP100YKL068W PML39Q03760 334 aa2.79□□□□□ -1.96
NUP100YKL068W SNU66Q12420 587 aaPredicted RBP2.79□□□□□ -1.96
NUP100YKL068W CFT1Q06632 1357 aaKnown RBP2.79□□□□□ -1.96
NUP100YKL068W CYT1P07143 309 aa2.79□□□□□ -1.96
NUP100YKL068W VAN1P23642 535 aa2.79□□□□□ -1.96
NUP100YKL068W YKL069WP36088 180 aa2.79□□□□□ -1.96
NUP100YKL068W YHR020WP38708 688 aaKnown RBP2.79□□□□□ -1.96
NUP100YKL068W MPP10P47083 593 aaKnown RBP2.79□□□□□ -1.96
NUP100YKL068W EAF6P47128 113 aa2.79□□□□□ -1.96
NUP100YKL068W TYW3P53177 273 aa2.79□□□□□ -1.96
NUP100YKL068W YGR021WP53212 290 aa2.79□□□□□ -1.96
NUP100YKL068W ESF2P53743 316 aaKnown RBP2.79□□□□□ -1.96
NUP100YKL068W YDR344CQ05510 147 aa2.79□□□□□ -1.96
NUP100YKL068W LSO1Q3E827 93 aa2.79□□□□□ -1.96
NUP100YKL068W DAL5P15365 543 aa2.78□□□□□ -1.96
NUP100YKL068W RPB10P22139 70 aa2.78□□□□□ -1.96
NUP100YKL068W NUD1P32336 851 aa2.78□□□□□ -1.96
NUP100YKL068W HIR1P32479 840 aa2.78□□□□□ -1.96
NUP100YKL068W SUV3P32580 737 aa2.78□□□□□ -1.96
NUP100YKL068W BLI1P35727 113 aa2.78□□□□□ -1.96
NUP100YKL068W YAP1801P38856 637 aa2.78□□□□□ -1.96
NUP100YKL068W TIF11P38912 153 aaKnown RBP2.78□□□□□ -1.96
NUP100YKL068W ISM1P48526 1002 aa2.78□□□□□ -1.96
NUP100YKL068W NAN1Q02931 896 aaKnown RBP2.78□□□□□ -1.96
NUP100YKL068W VMS1Q04311 632 aaKnown RBP2.78□□□□□ -1.96
NUP100YKL068W YPR097WQ06839 1073 aa2.78□□□□□ -1.96
NUP100YKL068W GAS4Q08271 471 aa2.78□□□□□ -1.96
NUP100YKL068W FLC1Q08967 793 aa2.78□□□□□ -1.96
NUP100YKL068W TSC13Q99190 310 aa2.78□□□□□ -1.96
NUP100YKL068W MPH2P0CD99 609 aa2.78□□□□□ -1.97
NUP100YKL068W RPL8AP17076 256 aaKnown RBP2.78□□□□□ -1.97
NUP100YKL068W OPI1P21957 404 aa2.78□□□□□ -1.97
NUP100YKL068W MNR2P35724 969 aa2.78□□□□□ -1.97
NUP100YKL068W PAF1P38351 445 aa2.78□□□□□ -1.97
NUP100YKL068W SNF7P39929 240 aaKnown RBP2.78□□□□□ -1.97
NUP100YKL068W RSP5P39940 809 aaKnown RBP2.78□□□□□ -1.97
NUP100YKL068W FIG4P42837 879 aa2.78□□□□□ -1.97
NUP100YKL068W TUB4P53378 473 aa2.78□□□□□ -1.97
NUP100YKL068W YNL035CP53962 389 aaKnown RBP2.78□□□□□ -1.97
NUP100YKL068W MEH1Q02205 184 aa2.78□□□□□ -1.97
NUP100YKL068W PEX29Q03370 554 aa2.78□□□□□ -1.97
NUP100YKL068W PIF1P07271 859 aa2.77□□□□□ -1.97
NUP100YKL068W TPD3P31383 635 aa2.77□□□□□ -1.97
NUP100YKL068W RPS0AP32905 252 aaKnown RBP2.77□□□□□ -1.97
NUP100YKL068W YHL008CP38750 627 aa2.77□□□□□ -1.97
NUP100YKL068W CHZ1P40019 153 aaPredicted RBP2.77□□□□□ -1.97
NUP100YKL068W RPA14P50106 137 aa2.77□□□□□ -1.97
NUP100YKL068W YGR122WP53272 402 aa2.77□□□□□ -1.97
NUP100YKL068W UTP13Q05946 817 aaKnown RBP2.77□□□□□ -1.97
NUP100YKL068W BUD20Q08004 166 aaPredicted RBP2.77□□□□□ -1.97
NUP100YKL068W DPS1P04802 557 aaKnown RBP2.77□□□□□ -1.97
NUP100YKL068W DPB3P27344 201 aa2.77□□□□□ -1.97
NUP100YKL068W GCD6P32501 712 aaKnown RBP2.77□□□□□ -1.97
NUP100YKL068W SEC61P32915 480 aa2.77□□□□□ -1.97
NUP100YKL068W MTC2P34246 357 aa2.77□□□□□ -1.97
NUP100YKL068W FAA3P39002 694 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms