RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	YGR122W	P53272	402 aa		4.81	□□□□□ -1.64
VHR1	YIL056W	POL5	P39985	1022 aa	Known RBP	4.8	□□□□□ -1.64
VHR1	YIL056W	BUD9	P53226	547 aa		4.8	□□□□□ -1.64
VHR1	YIL056W	SPR28	Q04921	423 aa		4.8	□□□□□ -1.64
VHR1	YIL056W	AVO1	Q08236	1176 aa		4.8	□□□□□ -1.64
VHR1	YIL056W	MCD1	Q12158	566 aa		4.8	□□□□□ -1.64
VHR1	YIL056W	MTR4	P47047	1073 aa	Known RBP	4.8	□□□□□ -1.64
VHR1	YIL056W	YJR107W	P47145	328 aa		4.8	□□□□□ -1.64
VHR1	YIL056W	KIP3	P53086	805 aa	Known RBP	4.8	□□□□□ -1.64
VHR1	YIL056W	ADI1	Q03677	179 aa		4.8	□□□□□ -1.64
VHR1	YIL056W	HVG1	P0CE11	249 aa		4.79	□□□□□ -1.64
VHR1	YIL056W	ERS1	P17261	260 aa		4.79	□□□□□ -1.64
VHR1	YIL056W	REI1	P38344	393 aa	Predicted RBP	4.79	□□□□□ -1.64
VHR1	YIL056W	SLN1	P39928	1220 aa	Predicted RBP	4.79	□□□□□ -1.64
VHR1	YIL056W	SAP155	P43612	1002 aa		4.79	□□□□□ -1.64
VHR1	YIL056W	ESF1	Q06344	628 aa	Known RBP	4.79	□□□□□ -1.64
VHR1	YIL056W	YDR215C	Q12240	137 aa		4.79	□□□□□ -1.64
VHR1	YIL056W	RAD2	P07276	1031 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	PRP5	P21372	849 aa	Predicted RBP	4.78	□□□□□ -1.64
VHR1	YIL056W	COQ2	P32378	372 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	SFA1	P32771	386 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	PEX28	P38848	579 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	FYV10	P40492	516 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	TOS4	Q06266	489 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	RRP15	Q06511	250 aa	Predicted RBP	4.78	□□□□□ -1.64
VHR1	YIL056W	YIG1	Q08956	461 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	HXK1	P04806	485 aa	Known RBP	4.78	□□□□□ -1.64
VHR1	YIL056W	MSH3	P25336	1018 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	GCV1	P48015	400 aa		4.78	□□□□□ -1.64
VHR1	YIL056W	NOP7	P53261	605 aa	Known RBP	4.78	□□□□□ -1.64
VHR1	YIL056W	ALG6	Q12001	544 aa	Known RBP	4.78	□□□□□ -1.64
VHR1	YIL056W	CYC8	P14922	966 aa		4.77	□□□□□ -1.65
VHR1	YIL056W	YNR063W	P53749	607 aa		4.77	□□□□□ -1.65
VHR1	YIL056W	MEC3	Q02574	474 aa		4.77	□□□□□ -1.65
VHR1	YIL056W	YPL109C	Q02981	657 aa		4.77	□□□□□ -1.65
VHR1	YIL056W	YOR223W	Q12015	292 aa		4.77	□□□□□ -1.65
VHR1	YIL056W	AI3	P03877	415 aa		4.76	□□□□□ -1.65
VHR1	YIL056W	AKR1	P39010	764 aa		4.76	□□□□□ -1.65
VHR1	YIL056W	DOT1	Q04089	582 aa	Known RBP	4.76	□□□□□ -1.65
VHR1	YIL056W	TY1A-NL1	Q12391	440 aa	Known RBP	4.76	□□□□□ -1.65
VHR1	YIL056W	YCK2	P23292	546 aa	Known RBP	4.76	□□□□□ -1.65
VHR1	YIL056W	JIP5	Q06214	492 aa	Predicted RBP	4.76	□□□□□ -1.65
VHR1	YIL056W	MCA1	Q08601	432 aa		4.76	□□□□□ -1.65
VHR1	YIL056W	DED1	P06634	604 aa	Known RBP	4.75	□□□□□ -1.65
VHR1	YIL056W	NAP1	P25293	417 aa	Known RBP	4.75	□□□□□ -1.65
VHR1	YIL056W	RAD27	P26793	382 aa		4.75	□□□□□ -1.65
VHR1	YIL056W	PET112	P33893	541 aa		4.75	□□□□□ -1.65
VHR1	YIL056W	MAD1	P40957	749 aa		4.75	□□□□□ -1.65
VHR1	YIL056W	MTC5	Q03897	1148 aa		4.75	□□□□□ -1.65
VHR1	YIL056W	MRL1	Q06815	381 aa		4.75	□□□□□ -1.65
VHR1	YIL056W	XKS1	P42826	600 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	SLS1	P42900	643 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	LSB3	P43603	459 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	ARI1	P53111	347 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	NOG1	Q02892	647 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	RMD1	Q03441	430 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	LAP2	Q10740	671 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-DR6	P0CX70	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-ER1	P0CX71	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-LR2	P0CX72	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-PL	P0CX73	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-JR1	P0CX74	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-LR3	P0CX75	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-ML2	P0CX76	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	SBP1	P10080	294 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	EXO5	P38289	585 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	HSE1	P38753	452 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	SKN7	P38889	622 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	ELA1	P53861	379 aa	Predicted RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-GR1	Q12085	440 aa		4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	TY1A-OL	Q92392	440 aa	Known RBP	4.74	□□□□□ -1.65
VHR1	YIL056W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	RIP-Chip
VHR1	YIL056W	VMA4	P22203	233 aa	Known RBP	4.73	□□□□□ -1.65
VHR1	YIL056W	GPT2	P36148	743 aa		4.73	□□□□□ -1.65
VHR1	YIL056W	ARL1	P38116	183 aa	Known RBP	4.73	□□□□□ -1.65
VHR1	YIL056W	CWC24	P53769	259 aa		4.73	□□□□□ -1.65
VHR1	YIL056W	YPL034W	Q03083	165 aa		4.73	□□□□□ -1.65
VHR1	YIL056W	REC8	Q12188	680 aa		4.73	□□□□□ -1.65
VHR1	YIL056W	SPO74	P45819	413 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	YGL140C	P53120	1219 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	NCE103	P53615	221 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	EST2	Q06163	884 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	GIC2	Q06648	383 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	NAM7	P30771	971 aa	Known RBP	4.72	□□□□□ -1.65
VHR1	YIL056W	NEM1	P38757	446 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	YAR028W	P39548	234 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	MET10	P39692	1035 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	PIC2	P40035	300 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	SVF1	Q05515	481 aa		4.72	□□□□□ -1.65
VHR1	YIL056W	YGR045C	P53229	120 aa		4.71	□□□□□ -1.66
VHR1	YIL056W	NSI1	Q12457	570 aa		4.71	□□□□□ -1.66
VHR1	YIL056W	CHS2	P14180	963 aa		4.7	□□□□□ -1.66
VHR1	YIL056W	CLN2	P20438	545 aa		4.7	□□□□□ -1.66
VHR1	YIL056W	ADD66	P36040	267 aa		4.7	□□□□□ -1.66
VHR1	YIL056W	UTP5	Q04177	643 aa	Known RBP	4.7	□□□□□ -1.66
VHR1	YIL056W	KAE1	P36132	386 aa		4.7	□□□□□ -1.66
VHR1	YIL056W	CCT8	P47079	568 aa	Known RBP	4.7	□□□□□ -1.66
VHR1	YIL056W	SEC23	P15303	768 aa	Known RBP	4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms