RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	NAP1	P25293	417 aa	Known RBP	5.35	□□□□□ -1.55
YPT35	YHR105W	DUT1	P33317	147 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	PET112	P33893	541 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	RRM3	P38766	723 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	LSB6	P42951	607 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	BUD9	P53226	547 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	YNR065C	P53751	1116 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	YPL109C	Q02981	657 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	MCA1	Q08601	432 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	SOG2	Q08817	791 aa		5.35	□□□□□ -1.55
YPT35	YHR105W	NPR1	P22211	790 aa		5.34	□□□□□ -1.55
YPT35	YHR105W	PRE9	P23638	258 aa	Known RBP	5.34	□□□□□ -1.55
YPT35	YHR105W	PIC2	P40035	300 aa		5.34	□□□□□ -1.55
YPT35	YHR105W	GIP2	P40036	548 aa		5.34	□□□□□ -1.55
YPT35	YHR105W	SAP155	P43612	1002 aa		5.34	□□□□□ -1.55
YPT35	YHR105W	SBP1	P10080	294 aa	Known RBP	5.33	□□□□□ -1.56
YPT35	YHR105W	PRP5	P21372	849 aa	Predicted RBP	5.33	□□□□□ -1.56
YPT35	YHR105W	TAT2	P38967	592 aa		5.33	□□□□□ -1.56
YPT35	YHR105W	TED1	P40533	473 aa		5.33	□□□□□ -1.56
YPT35	YHR105W	CLN2	P20438	545 aa		5.32	□□□□□ -1.56
YPT35	YHR105W	MNR2	P35724	969 aa		5.32	□□□□□ -1.56
YPT35	YHR105W	FAA4	P47912	694 aa	Known RBP	5.32	□□□□□ -1.56
YPT35	YHR105W	YAF9	P53930	226 aa		5.32	□□□□□ -1.56
YPT35	YHR105W	FPR4	Q06205	392 aa	Predicted RBP	5.32	□□□□□ -1.56
YPT35	YHR105W	TY4B-P	A0A0B7P3V8	1104 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	SPC42	P36094	363 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	RVS167	P39743	482 aa	Known RBP	5.31	□□□□□ -1.56
YPT35	YHR105W	MRPS18	P42847	217 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	GUP1	P53154	560 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	ULP1	Q02724	621 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	HAS1	Q03532	505 aa	Known RBP	5.31	□□□□□ -1.56
YPT35	YHR105W	PMT7	Q06644	662 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	GAS5	Q08193	484 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	TY4A-H	Q6Q5P6	413 aa		5.31	□□□□□ -1.56
YPT35	YHR105W	AI3	P03877	415 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	CIT2	P08679	460 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	SAC7	P17121	654 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	PAN5	P38787	379 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	NEO1	P40527	1151 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	FET4	P40988	552 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	YPL034W	Q03083	165 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	MCD1	Q12158	566 aa		5.3	□□□□□ -1.56
YPT35	YHR105W	CDC34	P14682	295 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	SFA1	P32771	386 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	BRN1	P38170	754 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	LEM3	P42838	414 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	GNP1	P48813	663 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	ADI1	Q03677	179 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	NSE3	Q05541	303 aa		5.29	□□□□□ -1.56
YPT35	YHR105W	GCR1	P07261	785 aa		5.28	□□□□□ -1.56
YPT35	YHR105W	HTS1	P07263	546 aa	Known RBP	5.28	□□□□□ -1.56
YPT35	YHR105W	YKL069W	P36088	180 aa		5.28	□□□□□ -1.56
YPT35	YHR105W	POL5	P39985	1022 aa	Known RBP	5.28	□□□□□ -1.56
YPT35	YHR105W	RNH70	P53331	553 aa		5.28	□□□□□ -1.56
YPT35	YHR105W	DSE4	P53753	1117 aa		5.28	□□□□□ -1.56
YPT35	YHR105W	CWC24	P53769	259 aa		5.28	□□□□□ -1.56
YPT35	YHR105W	GDE1	Q02979	1223 aa		5.28	□□□□□ -1.56
YPT35	YHR105W	PRI2	P20457	528 aa		5.27	□□□□□ -1.57
YPT35	YHR105W	YKL091C	P33324	310 aa	Known RBP	5.27	□□□□□ -1.57
YPT35	YHR105W	ARI1	P53111	347 aa	Known RBP	5.27	□□□□□ -1.57
YPT35	YHR105W	DOS2	P54858	310 aa		5.27	□□□□□ -1.57
YPT35	YHR105W	EEB1	Q02891	456 aa		5.27	□□□□□ -1.57
YPT35	YHR105W	BDF2	Q07442	638 aa		5.27	□□□□□ -1.57
YPT35	YHR105W	WRS1	Q12109	432 aa	Known RBP	5.27	□□□□□ -1.57
YPT35	YHR105W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-DR6	P0CX70	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-ER1	P0CX71	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-LR2	P0CX72	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-PL	P0CX73	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-JR1	P0CX74	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-LR3	P0CX75	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-ML2	P0CX76	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	HEM13	P11353	328 aa	Known RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	KAR2	P16474	682 aa	Known RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	RSC6	P25632	483 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	SRP40	P32583	406 aa	Predicted RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
YPT35	YHR105W	NMD2	P38798	1089 aa	Known RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	BUD6	P41697	788 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	YGR053C	P53234	283 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-GR1	Q12085	440 aa		5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	TY1A-OL	Q92392	440 aa	Known RBP	5.26	□□□□□ -1.57
YPT35	YHR105W	ERS1	P17261	260 aa		5.25	□□□□□ -1.57
YPT35	YHR105W	GRX1	P25373	110 aa	Known RBP	5.25	□□□□□ -1.57
YPT35	YHR105W	EXO5	P38289	585 aa		5.25	□□□□□ -1.57
YPT35	YHR105W	YJL049W	P47048	450 aa		5.25	□□□□□ -1.57
YPT35	YHR105W	PEX13	P80667	386 aa		5.25	□□□□□ -1.57
YPT35	YHR105W	NOG1	Q02892	647 aa	Known RBP	5.25	□□□□□ -1.57
YPT35	YHR105W	RPN4	Q03465	531 aa		5.25	□□□□□ -1.57
YPT35	YHR105W	SPO71	Q03868	1245 aa		5.25	□□□□□ -1.57
YPT35	YHR105W	TY1A-NL1	Q12391	440 aa	Known RBP	5.25	□□□□□ -1.57
YPT35	YHR105W	MSH3	P25336	1018 aa		5.24	□□□□□ -1.57
YPT35	YHR105W	PEX28	P38848	579 aa		5.24	□□□□□ -1.57
YPT35	YHR105W	SPF1	P39986	1215 aa	Known RBP	5.24	□□□□□ -1.57
YPT35	YHR105W	XKS1	P42826	600 aa		5.24	□□□□□ -1.57
YPT35	YHR105W	RSM26	P47141	266 aa		5.24	□□□□□ -1.57
YPT35	YHR105W	OPI10	Q08202	246 aa		5.24	□□□□□ -1.57
YPT35	YHR105W	PPM2	Q08282	695 aa		5.24	□□□□□ -1.57
YPT35	YHR105W	SEC23	P15303	768 aa	Known RBP	5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms