RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SEC8P32855 1065 aa5.24□□□□□ -1.57
LOC1YFR001W PGM1P33401 570 aaKnown RBP5.24□□□□□ -1.57
LOC1YFR001W FAA3P39002 694 aa5.24□□□□□ -1.57
LOC1YFR001W DSE4P53753 1117 aa5.24□□□□□ -1.57
LOC1YFR001W ULP1Q02724 621 aa5.24□□□□□ -1.57
LOC1YFR001W ARI1P53111 347 aaKnown RBP5.23□□□□□ -1.57
LOC1YFR001W YGR122WP53272 402 aa5.23□□□□□ -1.57
LOC1YFR001W ELG1Q12050 791 aa5.23□□□□□ -1.57
LOC1YFR001W MAE1P36013 669 aaKnown RBP5.22□□□□□ -1.57
LOC1YFR001W RPS26AP39938 119 aaKnown RBP5.22□□□□□ -1.57
LOC1YFR001W RPS26BP39939 119 aaKnown RBP5.22□□□□□ -1.57
LOC1YFR001W FYV10P40492 516 aa5.22□□□□□ -1.57
LOC1YFR001W UTP22P53254 1237 aaPredicted RBP5.22□□□□□ -1.57
LOC1YFR001W YPL109CQ02981 657 aa5.22□□□□□ -1.57
LOC1YFR001W OYE2Q03558 400 aaKnown RBP5.22□□□□□ -1.57
LOC1YFR001W YIG1Q08956 461 aa5.22□□□□□ -1.57
LOC1YFR001W TY1A-NL1Q12391 440 aaKnown RBP5.22□□□□□ -1.57
LOC1YFR001W NOG1Q02892 647 aaKnown RBP5.21□□□□□ -1.58
LOC1YFR001W ADI1Q03677 179 aa5.21□□□□□ -1.58
LOC1YFR001W CYC8P14922 966 aa5.2□□□□□ -1.58
LOC1YFR001W ERS1P17261 260 aa5.2□□□□□ -1.58
LOC1YFR001W YKL077WP36081 392 aa5.2□□□□□ -1.58
LOC1YFR001W EXO5P38289 585 aa5.2□□□□□ -1.58
LOC1YFR001W SHU2P38957 223 aa5.2□□□□□ -1.58
LOC1YFR001W GCV1P48015 400 aa5.2□□□□□ -1.58
LOC1YFR001W FAR11P53917 953 aa5.2□□□□□ -1.58
LOC1YFR001W SPR28Q04921 423 aa5.2□□□□□ -1.58
LOC1YFR001W RAD2P07276 1031 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-LR4P0C2I8 440 aaKnown RBP5.19□□□□□ -1.58
LOC1YFR001W TY1A-DR6P0CX70 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-ER1P0CX71 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-LR2P0CX72 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-PLP0CX73 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-JR1P0CX74 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-LR3P0CX75 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-ML2P0CX76 440 aa5.19□□□□□ -1.58
LOC1YFR001W MSH3P25336 1018 aa5.19□□□□□ -1.58
LOC1YFR001W PIC2P40035 300 aa5.19□□□□□ -1.58
LOC1YFR001W MRPS18P42847 217 aa5.19□□□□□ -1.58
LOC1YFR001W RSM26P47141 266 aa5.19□□□□□ -1.58
LOC1YFR001W PEX13P80667 386 aa5.19□□□□□ -1.58
LOC1YFR001W MEC3Q02574 474 aa5.19□□□□□ -1.58
LOC1YFR001W YMR074CQ04773 145 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-GR1Q12085 440 aa5.19□□□□□ -1.58
LOC1YFR001W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.19□□□□□ -1.58
LOC1YFR001W TY1A-OLQ92392 440 aaKnown RBP5.19□□□□□ -1.58
LOC1YFR001W PRE9P23638 258 aaKnown RBP5.18□□□□□ -1.58
LOC1YFR001W RSC6P25632 483 aa5.18□□□□□ -1.58
LOC1YFR001W SQT1P35184 431 aa5.18□□□□□ -1.58
LOC1YFR001W PEX28P38848 579 aa5.18□□□□□ -1.58
LOC1YFR001W NCE103P53615 221 aa5.18□□□□□ -1.58
LOC1YFR001W ALO1P54783 526 aaKnown RBP5.18□□□□□ -1.58
LOC1YFR001W MCD1Q12158 566 aa5.18□□□□□ -1.58
LOC1YFR001W YLL054CQ12244 843 aa5.18□□□□□ -1.58
LOC1YFR001W ARL1P38116 183 aaKnown RBP5.17□□□□□ -1.58
LOC1YFR001W SLS1P42900 643 aa5.17□□□□□ -1.58
LOC1YFR001W KIP3P53086 805 aaKnown RBP5.17□□□□□ -1.58
LOC1YFR001W MAC1P35192 417 aa5.16□□□□□ -1.58
LOC1YFR001W REI1P38344 393 aaPredicted RBP5.16□□□□□ -1.58
LOC1YFR001W NEM1P38757 446 aa5.16□□□□□ -1.58
LOC1YFR001W INP52P50942 1183 aa5.16□□□□□ -1.58
LOC1YFR001W YGL140CP53120 1219 aa5.16□□□□□ -1.58
LOC1YFR001W REC8Q12188 680 aa5.16□□□□□ -1.58
LOC1YFR001W HEM13P11353 328 aaKnown RBP5.15□□□□□ -1.59
LOC1YFR001W PEP7P32609 515 aa5.15□□□□□ -1.59
LOC1YFR001W SNU71P53207 620 aaKnown RBP5.15□□□□□ -1.59
LOC1YFR001W RMD1Q03441 430 aa5.15□□□□□ -1.59
LOC1YFR001W ESF1Q06344 628 aaKnown RBP5.15□□□□□ -1.59
LOC1YFR001W YOR223WQ12015 292 aa5.15□□□□□ -1.59
LOC1YFR001W VMA4P22203 233 aaKnown RBP5.14□□□□□ -1.59
LOC1YFR001W COQ2P32378 372 aa5.14□□□□□ -1.59
LOC1YFR001W OMA1P36163 345 aa5.14□□□□□ -1.59
LOC1YFR001W RDH54P38086 958 aa5.14□□□□□ -1.59
LOC1YFR001W MTR4P47047 1073 aaKnown RBP5.14□□□□□ -1.59
LOC1YFR001W UTP5Q04177 643 aaKnown RBP5.14□□□□□ -1.59
LOC1YFR001W ALG6Q12001 544 aaKnown RBP5.14□□□□□ -1.59
LOC1YFR001W YLR122CQ12312 125 aa5.14□□□□□ -1.59
LOC1YFR001W SEC23P15303 768 aaKnown RBP5.13□□□□□ -1.59
LOC1YFR001W DOT1Q04089 582 aaKnown RBP5.13□□□□□ -1.59
LOC1YFR001W NAM7P30771 971 aaKnown RBP5.12□□□□□ -1.59
LOC1YFR001W KAE1P36132 386 aa5.12□□□□□ -1.59
LOC1YFR001W GPT2P36148 743 aa5.12□□□□□ -1.59
LOC1YFR001W YKR073CP36153 106 aa5.12□□□□□ -1.59
LOC1YFR001W YGR045CP53229 120 aa5.12□□□□□ -1.59
LOC1YFR001W TRP3P00937 484 aa5.11□□□□□ -1.59
LOC1YFR001W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
LOC1YFR001W SAF1P38352 637 aa5.11□□□□□ -1.59
LOC1YFR001W XKS1P42826 600 aa5.11□□□□□ -1.59
LOC1YFR001W SPO74P45819 413 aa5.11□□□□□ -1.59
LOC1YFR001W AVO1Q08236 1176 aa5.11□□□□□ -1.59
LOC1YFR001W GCR1P07261 785 aa5.1□□□□□ -1.59
LOC1YFR001W TAF13P11747 167 aa5.1□□□□□ -1.59
LOC1YFR001W ELA1P53861 379 aaPredicted RBP5.1□□□□□ -1.59
LOC1YFR001W SVF1Q05515 481 aa5.1□□□□□ -1.59
LOC1YFR001W HDA2Q06629 674 aa5.1□□□□□ -1.59
LOC1YFR001W GIC2Q06648 383 aa5.1□□□□□ -1.59
LOC1YFR001W MED7Q08278 222 aa5.1□□□□□ -1.59
LOC1YFR001W ADD66P36040 267 aa5.09□□□□□ -1.59
LOC1YFR001W PAM1P37304 830 aaKnown RBP5.09□□□□□ -1.59
LOC1YFR001W AKR1P39010 764 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms