RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C MSN5P52918 1224 aa5.21□□□□□ -1.58
SPB4YFL002C VPS72Q03388 795 aa5.21□□□□□ -1.58
SPB4YFL002C YDR444WQ04093 687 aa5.21□□□□□ -1.58
SPB4YFL002C CIT1P00890 479 aa5.2□□□□□ -1.58
SPB4YFL002C CAN1P04817 590 aa5.2□□□□□ -1.58
SPB4YFL002C HSP60P19882 572 aaKnown RBP5.2□□□□□ -1.58
SPB4YFL002C IRR1P40541 1150 aa5.2□□□□□ -1.58
SPB4YFL002C TAF13P11747 167 aa5.2□□□□□ -1.58
SPB4YFL002C PYC2P32327 1180 aaKnown RBP5.2□□□□□ -1.58
SPB4YFL002C SQT1P35184 431 aa5.2□□□□□ -1.58
SPB4YFL002C MRP8P35719 219 aa5.2□□□□□ -1.58
SPB4YFL002C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SPB4YFL002C PMT7Q06644 662 aa5.2□□□□□ -1.58
SPB4YFL002C FMP25Q08023 583 aa5.2□□□□□ -1.58
SPB4YFL002C IRE1P32361 1115 aa5.19□□□□□ -1.58
SPB4YFL002C RSM26P47141 266 aa5.19□□□□□ -1.58
SPB4YFL002C YNR029CP53729 429 aaKnown RBP5.19□□□□□ -1.58
SPB4YFL002C SEC23P15303 768 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C SBA1P28707 216 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C VBA5P36172 582 aa5.18□□□□□ -1.58
SPB4YFL002C GRX7P38068 203 aa5.18□□□□□ -1.58
SPB4YFL002C PEX28P38848 579 aa5.18□□□□□ -1.58
SPB4YFL002C YIL165CP40446 119 aa5.18□□□□□ -1.58
SPB4YFL002C ZDS1P50111 915 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C YGL140CP53120 1219 aa5.18□□□□□ -1.58
SPB4YFL002C ERP6P53198 216 aa5.18□□□□□ -1.58
SPB4YFL002C SPO20Q04359 397 aa5.18□□□□□ -1.58
SPB4YFL002C TRP2P00899 507 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C SBP1P10080 294 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C MRC1P25588 1096 aa5.18□□□□□ -1.58
SPB4YFL002C MSH2P25847 964 aa5.18□□□□□ -1.58
SPB4YFL002C ASH1P34233 588 aa5.18□□□□□ -1.58
SPB4YFL002C ENP1P38333 483 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C PFD1P46988 109 aa5.18□□□□□ -1.58
SPB4YFL002C NOG1Q02892 647 aaKnown RBP5.18□□□□□ -1.58
SPB4YFL002C EAF1Q06337 982 aa5.18□□□□□ -1.58
SPB4YFL002C HDA2Q06629 674 aa5.18□□□□□ -1.58
SPB4YFL002C RPL8AP17076 256 aaKnown RBP5.17□□□□□ -1.58
SPB4YFL002C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58 RIP-Chip
SPB4YFL002C ARE1P25628 610 aa5.17□□□□□ -1.58
SPB4YFL002C LYP1P32487 611 aa5.17□□□□□ -1.58
SPB4YFL002C PBY1P38254 753 aa5.17□□□□□ -1.58
SPB4YFL002C PAF1P38351 445 aa5.17□□□□□ -1.58
SPB4YFL002C PMC1P38929 1173 aaPredicted RBP5.17□□□□□ -1.58
SPB4YFL002C HXT13P39924 564 aa5.17□□□□□ -1.58
SPB4YFL002C HUL4P40985 892 aa5.17□□□□□ -1.58
SPB4YFL002C SKP1P52286 194 aa5.17□□□□□ -1.58
SPB4YFL002C HXT17P53631 564 aa5.17□□□□□ -1.58
SPB4YFL002C HST3P53687 447 aa5.17□□□□□ -1.58
SPB4YFL002C HXT15P54854 567 aa5.17□□□□□ -1.58
SPB4YFL002C CUS1Q02554 436 aaPredicted RBP5.17□□□□□ -1.58
SPB4YFL002C NTG2Q08214 380 aa5.17□□□□□ -1.58
SPB4YFL002C ADR1P07248 1323 aa5.17□□□□□ -1.58
SPB4YFL002C LEU1P07264 779 aaKnown RBP5.16□□□□□ -1.58
SPB4YFL002C ABD1P32783 436 aaPredicted RBP5.16□□□□□ -1.58
SPB4YFL002C RER2P35196 286 aa5.16□□□□□ -1.58
SPB4YFL002C AHP1P38013 176 aaKnown RBP5.16□□□□□ -1.58
SPB4YFL002C SEA4P38164 1038 aa5.16□□□□□ -1.58
SPB4YFL002C RIM11P38615 370 aa5.16□□□□□ -1.58
SPB4YFL002C ITC1P53125 1264 aa5.16□□□□□ -1.58
SPB4YFL002C UTP8P53276 713 aaKnown RBP5.16□□□□□ -1.58
SPB4YFL002C SIW14P53965 281 aa5.16□□□□□ -1.58
SPB4YFL002C MET32Q12041 191 aa5.16□□□□□ -1.58
SPB4YFL002C HEM13P11353 328 aaKnown RBP5.16□□□□□ -1.58
SPB4YFL002C PRP5P21372 849 aaPredicted RBP5.16□□□□□ -1.58
SPB4YFL002C PDC6P26263 563 aaKnown RBP5.16□□□□□ -1.58
SPB4YFL002C SFP1P32432 683 aa5.16□□□□□ -1.58
SPB4YFL002C SLA1P32790 1244 aa5.16□□□□□ -1.58
SPB4YFL002C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
SPB4YFL002C ENT3P47160 408 aa5.16□□□□□ -1.58
SPB4YFL002C FOL1P53848 824 aa5.16□□□□□ -1.58
SPB4YFL002C PEX13P80667 386 aa5.16□□□□□ -1.58
SPB4YFL002C TAF8Q03750 510 aa5.16□□□□□ -1.58
SPB4YFL002C ESC2Q06340 456 aa5.16□□□□□ -1.58
SPB4YFL002C BUD21Q08492 214 aaPredicted RBP5.16□□□□□ -1.58
SPB4YFL002C PSH1Q12161 406 aa5.16□□□□□ -1.58
SPB4YFL002C UGO1Q03327 502 aa5.15□□□□□ -1.59
SPB4YFL002C YLR225CQ05948 407 aaKnown RBP5.15□□□□□ -1.59
SPB4YFL002C CMR1Q12510 522 aaKnown RBP5.15□□□□□ -1.59
SPB4YFL002C ARG82P07250 355 aa5.14□□□□□ -1.59
SPB4YFL002C NPR1P22211 790 aa5.14□□□□□ -1.59
SPB4YFL002C MSH3P25336 1018 aa5.14□□□□□ -1.59
SPB4YFL002C DAL1P32375 460 aa5.14□□□□□ -1.59
SPB4YFL002C APM2P38700 605 aa5.14□□□□□ -1.59
SPB4YFL002C NAB3P38996 802 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SPB4YFL002C RTA1P53047 317 aa5.14□□□□□ -1.59
SPB4YFL002C LCB5Q06147 687 aaKnown RBP5.14□□□□□ -1.59
SPB4YFL002C TY1A-DR3Q12441 440 aa5.14□□□□□ -1.59
SPB4YFL002C AFT1P22149 690 aa5.13□□□□□ -1.59
SPB4YFL002C RDH54P38086 958 aa5.13□□□□□ -1.59
SPB4YFL002C SHU2P38957 223 aa5.13□□□□□ -1.59
SPB4YFL002C AAD14P42884 376 aa5.13□□□□□ -1.59
SPB4YFL002C UGA3P26370 528 aa5.13□□□□□ -1.59
SPB4YFL002C TPO2P53283 614 aa5.13□□□□□ -1.59
SPB4YFL002C REC8Q12188 680 aa5.13□□□□□ -1.59
SPB4YFL002C RGP1P16664 663 aa5.12□□□□□ -1.59
SPB4YFL002C SEC6P32844 805 aa5.12□□□□□ -1.59
SPB4YFL002C BET3P36149 193 aa5.12□□□□□ -1.59
SPB4YFL002C VTC4P47075 721 aa5.12□□□□□ -1.59
SPB4YFL002C HSV2P50079 448 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms