RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	POL32	P47110	350 aa		5.77	□□□□□ -1.49
UBC8	YEL012W	ALD3	P54114	506 aa		5.77	□□□□□ -1.49
UBC8	YEL012W	RPS31	P05759	152 aa	Known RBP	5.76	□□□□□ -1.49
UBC8	YEL012W	ASF1	P32447	279 aa		5.76	□□□□□ -1.49
UBC8	YEL012W	CHZ1	P40019	153 aa	Predicted RBP	5.76	□□□□□ -1.49
UBC8	YEL012W	ORC1	P54784	914 aa	Predicted RBP	5.76	□□□□□ -1.49
UBC8	YEL012W	STB3	Q12427	513 aa		5.76	□□□□□ -1.49
UBC8	YEL012W	VMA3	P25515	160 aa		5.75	□□□□□ -1.49
UBC8	YEL012W	UGA3	P26370	528 aa		5.75	□□□□□ -1.49
UBC8	YEL012W	SQS1	P53866	767 aa	Known RBP	5.75	□□□□□ -1.49
UBC8	YEL012W	UTP4	Q06679	776 aa	Known RBP	5.75	□□□□□ -1.49
UBC8	YEL012W	RPO41	P13433	1351 aa	Known RBP	5.75	□□□□□ -1.49
UBC8	YEL012W	SPT7	P35177	1332 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	ARG82	P07250	355 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	TOS1	P38288	455 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	MSN5	P52918	1224 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	YDR444W	Q04093	687 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	RIX7	Q07844	837 aa	Known RBP	5.74	□□□□□ -1.49
UBC8	YEL012W	TY1A-DR3	Q12441	440 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	Q0182	Q9ZZW1	134 aa		5.74	□□□□□ -1.49
UBC8	YEL012W	SIR4	P11978	1358 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	MLF3	P32047	452 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	SLA1	P32790	1244 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	JJJ2	P46997	583 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	PTK2	P47116	818 aa	Known RBP	5.73	□□□□□ -1.49
UBC8	YEL012W	YJR107W	P47145	328 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	SUT1	P53032	299 aa	Known RBP	5.73	□□□□□ -1.49
UBC8	YEL012W	UFD2	P54860	961 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	KIN4	Q01919	800 aa		5.73	□□□□□ -1.49
UBC8	YEL012W	PHO4	P07270	312 aa	Known RBP	5.72	□□□□□ -1.49
UBC8	YEL012W	YJR115W	P47152	169 aa		5.72	□□□□□ -1.49
UBC8	YEL012W	BUG1	Q12191	341 aa		5.72	□□□□□ -1.49
UBC8	YEL012W	MHP1	P43638	1398 aa		5.71	□□□□□ -1.5
UBC8	YEL012W	DLD1	P32891	587 aa		5.71	□□□□□ -1.5
UBC8	YEL012W	YER156C	P40093	338 aa	Known RBP	5.71	□□□□□ -1.5
UBC8	YEL012W	ALA1	P40825	983 aa	Known RBP	5.71	□□□□□ -1.5
UBC8	YEL012W	SAP155	P43612	1002 aa		5.71	□□□□□ -1.5
UBC8	YEL012W	MEC3	Q02574	474 aa		5.71	□□□□□ -1.5
UBC8	YEL012W	LCB5	Q06147	687 aa	Known RBP	5.71	□□□□□ -1.5
UBC8	YEL012W	DAL1	P32375	460 aa		5.7	□□□□□ -1.5
UBC8	YEL012W	SEC8	P32855	1065 aa		5.7	□□□□□ -1.5
UBC8	YEL012W	QDR2	P40474	542 aa		5.7	□□□□□ -1.5
UBC8	YEL012W	HXT8	P40886	569 aa		5.7	□□□□□ -1.5
UBC8	YEL012W	VTC4	P47075	721 aa		5.7	□□□□□ -1.5
UBC8	YEL012W	TOM1	Q03280	3268 aa		5.69	□□□□□ -1.5
UBC8	YEL012W	IRE1	P32361	1115 aa		5.69	□□□□□ -1.5
UBC8	YEL012W	FYV10	P40492	516 aa		5.69	□□□□□ -1.5
UBC8	YEL012W	YJR098C	P47139	656 aa		5.69	□□□□□ -1.5
UBC8	YEL012W	ATG13	Q06628	738 aa		5.69	□□□□□ -1.5
UBC8	YEL012W	PSH1	Q12161	406 aa		5.69	□□□□□ -1.5
UBC8	YEL012W	CTT1	P06115	562 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	RAD4	P14736	754 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	RPC31	P17890	251 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	MSN1	P22148	382 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	PDC6	P26263	563 aa	Known RBP	5.68	□□□□□ -1.5
UBC8	YEL012W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
UBC8	YEL012W	SMC1	P32908	1225 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	LDH1	P38139	375 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	RGD2	P43556	714 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	NUP85	P46673	744 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	CDC55	Q00362	526 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	RSC4	Q02206	625 aa		5.68	□□□□□ -1.5
UBC8	YEL012W	OYE2	Q03558	400 aa	Known RBP	5.68	□□□□□ -1.5
UBC8	YEL012W	AUS1	Q08409	1394 aa		5.67	□□□□□ -1.5
UBC8	YEL012W	LEU1	P07264	779 aa	Known RBP	5.67	□□□□□ -1.5
UBC8	YEL012W	KAP122	P32767	1081 aa		5.67	□□□□□ -1.5
UBC8	YEL012W	DYS1	P38791	387 aa		5.67	□□□□□ -1.5
UBC8	YEL012W	NTA1	P40354	457 aa		5.67	□□□□□ -1.5
UBC8	YEL012W	DAK2	P43550	591 aa		5.67	□□□□□ -1.5
UBC8	YEL012W	UTP22	P53254	1237 aa	Predicted RBP	5.67	□□□□□ -1.5
UBC8	YEL012W	YNL011C	P53980	444 aa		5.67	□□□□□ -1.5
UBC8	YEL012W	INP54	Q08227	384 aa	Known RBP	5.67	□□□□□ -1.5
UBC8	YEL012W	OSM1	P21375	501 aa	Known RBP	5.66	□□□□□ -1.5
UBC8	YEL012W	AHP1	P38013	176 aa	Known RBP	5.66	□□□□□ -1.5
UBC8	YEL012W	ERT1	P38140	529 aa		5.66	□□□□□ -1.5
UBC8	YEL012W	MGE1	P38523	228 aa		5.66	□□□□□ -1.5
UBC8	YEL012W	TOS4	Q06266	489 aa		5.66	□□□□□ -1.5
UBC8	YEL012W	CTI6	Q08923	506 aa		5.66	□□□□□ -1.5
UBC8	YEL012W	MLP1	Q02455	1875 aa	Known RBP	5.66	□□□□□ -1.5
UBC8	YEL012W	GRX1	P25373	110 aa	Known RBP	5.65	□□□□□ -1.5
UBC8	YEL012W	MCM2	P29469	868 aa		5.65	□□□□□ -1.5
UBC8	YEL012W	YKL222C	P35995	705 aa		5.65	□□□□□ -1.5
UBC8	YEL012W	MET1	P36150	593 aa		5.65	□□□□□ -1.5
UBC8	YEL012W	BSD2	P38356	321 aa		5.65	□□□□□ -1.5
UBC8	YEL012W	RAD55	P38953	406 aa		5.65	□□□□□ -1.5
UBC8	YEL012W	TIF6	Q12522	245 aa	Known RBP	5.65	□□□□□ -1.5
UBC8	YEL012W	TOP1	P04786	769 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	RPT1	P33299	467 aa	Known RBP	5.64	□□□□□ -1.51
UBC8	YEL012W	VPS35	P34110	944 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	YTA6	P40328	754 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	LSC2	P53312	427 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	HIM1	Q06674	414 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	YDL176W	Q12027	708 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	SRF1	Q12516	437 aa		5.64	□□□□□ -1.51
UBC8	YEL012W	IRS4	P36115	615 aa	Known RBP	5.63	□□□□□ -1.51
UBC8	YEL012W	PSY2	P40164	858 aa		5.63	□□□□□ -1.51
UBC8	YEL012W	SKP1	P52286	194 aa		5.63	□□□□□ -1.51
UBC8	YEL012W	MTO1	P53070	669 aa		5.63	□□□□□ -1.51
UBC8	YEL012W	SPR28	Q04921	423 aa		5.63	□□□□□ -1.51
UBC8	YEL012W	SVF1	Q05515	481 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms