RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	HUL5	P53119	910 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	FPK1	P53739	893 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	ELG1	Q12050	791 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	RAD3	P06839	778 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	PRP16	P15938	1071 aa	Predicted RBP	4.78	□□□□□ -1.64
UPC2	YDR213W	SEC14	P24280	304 aa	Known RBP	4.78	□□□□□ -1.64
UPC2	YDR213W	MCM4	P30665	933 aa	Known RBP	4.78	□□□□□ -1.64
UPC2	YDR213W	PTC4	P38089	393 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	ISW1	P38144	1129 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	ECM21	P38167	1117 aa	Known RBP	4.78	□□□□□ -1.64
UPC2	YDR213W	OLA1	P38219	394 aa	Known RBP	4.78	□□□□□ -1.64
UPC2	YDR213W	SPO19	Q03029	223 aa		4.78	□□□□□ -1.64
UPC2	YDR213W	RGP1	P16664	663 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	ESS1	P22696	170 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	SEC65	P29478	273 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	BOI2	P39969	1040 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	MIC19	P43594	170 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	APL6	P46682	809 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	PEX21	P50091	288 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	TAN1	P53072	289 aa	Predicted RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	LCB5	Q06147	687 aa	Known RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	YCG1	Q06680	1035 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	ENO1	P00924	437 aa	Known RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	ENO2	P00925	437 aa	Known RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	RDS2	P19541	446 aa	Known RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	RAD53	P22216	821 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	ARG1	P22768	420 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	GCD7	P32502	381 aa	Predicted RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	ZUO1	P32527	433 aa	Known RBP	4.77	□□□□□ -1.65
UPC2	YDR213W	RRN6	P32786	894 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	EPL1	P43572	832 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	VPS75	P53853	264 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	SEC5	P89102	971 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	YLR001C	Q07895	862 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	AFT2	Q08957	416 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	RAD59	Q12223	238 aa		4.77	□□□□□ -1.65
UPC2	YDR213W	RPO26	P20435	155 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	SAC6	P32599	642 aa	Known RBP	4.76	□□□□□ -1.65
UPC2	YDR213W	NUP133	P36161	1157 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	SMF1	P38925	575 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	SIT1	P39980	628 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	HUL4	P40985	892 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	ALO1	P54783	526 aa	Known RBP	4.76	□□□□□ -1.65
UPC2	YDR213W	CMS1	Q07897	291 aa	Known RBP	4.76	□□□□□ -1.65
UPC2	YDR213W	HSP82	P02829	709 aa	Known RBP	4.76	□□□□□ -1.65
UPC2	YDR213W	RAD54	P32863	898 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	MAM1	P40065	302 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	BET4	Q00618	327 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	ESF1	Q06344	628 aa	Known RBP	4.76	□□□□□ -1.65
UPC2	YDR213W	SAM3	Q08986	587 aa		4.76	□□□□□ -1.65
UPC2	YDR213W	MRP7	P12687	371 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	IMP2'	P32351	346 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	MAC1	P35192	417 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	YKR018C	P36114	725 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	BUD6	P41697	788 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	MTR4	P47047	1073 aa	Known RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	YPT11	P48559	417 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	GRE2	Q12068	342 aa	Known RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	ATG9	Q12142	997 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	KRS1	P15180	591 aa	Known RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	HCA4	P20448	770 aa	Known RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	KTR3	P38130	404 aa	Predicted RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	STM1	P39015	273 aa	Known RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	TFG2	P41896	400 aa	Predicted RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	YJR079W	P47126	109 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	HST2	P53686	357 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	VPS64	Q03944	604 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	RLP24	Q07915	199 aa	Known RBP	4.75	□□□□□ -1.65
UPC2	YDR213W	SMC6	Q12749	1114 aa		4.75	□□□□□ -1.65
UPC2	YDR213W	RPS6A	P0CX37	236 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	RPS6B	P0CX38	236 aa	Predicted RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	PAP1	P29468	568 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	SHM1	P37292	490 aa	Predicted RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	HXT10	P43581	546 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	ATH1	P48016	1211 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	PUS5	Q06244	254 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	RSF2	P46974	1380 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	STE11	P23561	717 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	RRP14	P36080	434 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	YBL036C	P38197	257 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	RIO2	P40160	425 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	TRS85	P46944	698 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	VPS38	Q05919	439 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	YPL150W	Q12152	901 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	NKP1	Q12493	238 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	NCB2	Q92317	146 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	TPM1	P17536	199 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	DPB3	P27344	201 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	PDB1	P32473	366 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	RRP1	P35178	278 aa	Predicted RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	MUD2	P36084	527 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	ATG3	P40344	310 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	RIM21	P48565	533 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	BOP3	P53958	396 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	VPS30	Q02948	557 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	UBX2	Q04228	584 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	RRP15	Q06511	250 aa	Predicted RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	BRE1	Q07457	700 aa	Known RBP	4.74	□□□□□ -1.65
UPC2	YDR213W	HAT1	Q12341	374 aa		4.74	□□□□□ -1.65
UPC2	YDR213W	APC1	P53886	1748 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms