RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W SAM37P50110 327 aa3.55□□□□□ -1.84
SPB1YCL054W YGR053CP53234 283 aa3.55□□□□□ -1.84
SPB1YCL054W BSC2Q05611 235 aa3.55□□□□□ -1.84
SPB1YCL054W YOR1P53049 1477 aa3.55□□□□□ -1.84
SPB1YCL054W RPA190P10964 1664 aaKnown RBP3.55□□□□□ -1.84
SPB1YCL054W COBP00163 385 aa3.54□□□□□ -1.84
SPB1YCL054W NAB2P32505 525 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SPB1YCL054W YHR020WP38708 688 aaKnown RBP3.54□□□□□ -1.84
SPB1YCL054W NOC3Q07896 663 aaPredicted RBP3.54□□□□□ -1.84
SPB1YCL054W WRS1Q12109 432 aaKnown RBP3.54□□□□□ -1.84
SPB1YCL054W DUR3P33413 735 aa3.54□□□□□ -1.84
SPB1YCL054W YKL069WP36088 180 aa3.54□□□□□ -1.84
SPB1YCL054W SUM1P46676 1062 aa3.54□□□□□ -1.84
SPB1YCL054W HUL5P53119 910 aa3.54□□□□□ -1.84
SPB1YCL054W TDA6Q06466 467 aa3.54□□□□□ -1.84
SPB1YCL054W TIF6Q12522 245 aaKnown RBP3.54□□□□□ -1.84
SPB1YCL054W TRM732Q03496 1420 aa3.54□□□□□ -1.84
SPB1YCL054W SMC4Q12267 1418 aa3.54□□□□□ -1.84
SPB1YCL054W TOP1P04786 769 aa3.53□□□□□ -1.84
SPB1YCL054W RPS31P05759 152 aaKnown RBP3.53□□□□□ -1.84
SPB1YCL054W CDC34P14682 295 aa3.53□□□□□ -1.84
SPB1YCL054W MSN1P22148 382 aa3.53□□□□□ -1.84
SPB1YCL054W PRE9P23638 258 aaKnown RBP3.53□□□□□ -1.84
SPB1YCL054W SCD5P34758 872 aa3.53□□□□□ -1.84
SPB1YCL054W PIC2P40035 300 aa3.53□□□□□ -1.84
SPB1YCL054W UTP7P40055 554 aaKnown RBP3.53□□□□□ -1.84
SPB1YCL054W NTA1P40354 457 aa3.53□□□□□ -1.84
SPB1YCL054W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SPB1YCL054W UBX5Q06682 500 aa3.53□□□□□ -1.84
SPB1YCL054W INP54Q08227 384 aaKnown RBP3.53□□□□□ -1.84
SPB1YCL054W CDC53Q12018 815 aaKnown RBP3.53□□□□□ -1.84
SPB1YCL054W SPP41P38904 1435 aa3.53□□□□□ -1.84
SPB1YCL054W BOI2P39969 1040 aa3.53□□□□□ -1.84
SPB1YCL054W YFL066CP43538 392 aa3.53□□□□□ -1.84
SPB1YCL054W DAL4Q04895 635 aa3.53□□□□□ -1.84
SPB1YCL054W SMC1P32908 1225 aa3.52□□□□□ -1.85
SPB1YCL054W FPR3P38911 411 aaKnown RBP3.52□□□□□ -1.85
SPB1YCL054W YJR008WP47085 338 aa3.52□□□□□ -1.85
SPB1YCL054W FLP1P03870 423 aa3.52□□□□□ -1.85
SPB1YCL054W GRX4P32642 244 aa3.52□□□□□ -1.85
SPB1YCL054W GDE1Q02979 1223 aa3.52□□□□□ -1.85
SPB1YCL054W YPL109CQ02981 657 aa3.52□□□□□ -1.85
SPB1YCL054W UTP4Q06679 776 aaKnown RBP3.52□□□□□ -1.85
SPB1YCL054W Q0182Q9ZZW1 134 aa3.52□□□□□ -1.85
SPB1YCL054W LTE1P07866 1435 aa3.51□□□□□ -1.85
SPB1YCL054W MLF3P32047 452 aa3.51□□□□□ -1.85
SPB1YCL054W PRP40P33203 583 aaKnown RBP3.51□□□□□ -1.85
SPB1YCL054W SHM1P37292 490 aaPredicted RBP3.51□□□□□ -1.85
SPB1YCL054W MCX1P38323 520 aaPredicted RBP3.51□□□□□ -1.85
SPB1YCL054W CIC1P38779 376 aaKnown RBP3.51□□□□□ -1.85
SPB1YCL054W RAD55P38953 406 aa3.51□□□□□ -1.85
SPB1YCL054W SPF1P39986 1215 aaKnown RBP3.51□□□□□ -1.85
SPB1YCL054W PSY2P40164 858 aa3.51□□□□□ -1.85
SPB1YCL054W URN1Q06525 465 aaKnown RBP3.51□□□□□ -1.85
SPB1YCL054W OXR1Q08952 273 aa3.51□□□□□ -1.85
SPB1YCL054W TSR4P25040 408 aa3.51□□□□□ -1.85
SPB1YCL054W MCM5P29496 775 aaKnown RBP3.51□□□□□ -1.85
SPB1YCL054W STE5P32917 917 aa3.51□□□□□ -1.85
SPB1YCL054W SSN3P39073 555 aa3.51□□□□□ -1.85
SPB1YCL054W YTA6P40328 754 aa3.51□□□□□ -1.85
SPB1YCL054W QDR2P40474 542 aa3.51□□□□□ -1.85
SPB1YCL054W SBE2P42223 864 aaKnown RBP3.51□□□□□ -1.85
SPB1YCL054W GNP1P48813 663 aa3.51□□□□□ -1.85
SPB1YCL054W EEB1Q02891 456 aa3.51□□□□□ -1.85
SPB1YCL054W YCS4Q06156 1176 aa3.51□□□□□ -1.85
SPB1YCL054W OPI10Q08202 246 aa3.51□□□□□ -1.85
SPB1YCL054W TSC11P40061 1430 aa3.51□□□□□ -1.85
SPB1YCL054W GCR1P07261 785 aa3.5□□□□□ -1.85
SPB1YCL054W RPC31P17890 251 aa3.5□□□□□ -1.85
SPB1YCL054W PRI2P20457 528 aa3.5□□□□□ -1.85
SPB1YCL054W TIM23P32897 222 aa3.5□□□□□ -1.85
SPB1YCL054W TOM20P35180 183 aa3.5□□□□□ -1.85
SPB1YCL054W IRS4P36115 615 aaKnown RBP3.5□□□□□ -1.85
SPB1YCL054W TAT1P38085 619 aa3.5□□□□□ -1.85
SPB1YCL054W OSW7P43611 510 aa3.5□□□□□ -1.85
SPB1YCL054W YJR142WP47173 342 aa3.5□□□□□ -1.85
SPB1YCL054W VTH1P40438 1549 aa3.5□□□□□ -1.85
SPB1YCL054W VTH2P40890 1549 aa3.5□□□□□ -1.85
SPB1YCL054W RAD4P14736 754 aa3.5□□□□□ -1.85
SPB1YCL054W LDH1P38139 375 aa3.5□□□□□ -1.85
SPB1YCL054W BSD2P38356 321 aa3.5□□□□□ -1.85
SPB1YCL054W NUP82P40368 713 aa3.5□□□□□ -1.85
SPB1YCL054W ULP1Q02724 621 aa3.5□□□□□ -1.85
SPB1YCL054W MCD1Q12158 566 aa3.5□□□□□ -1.85
SPB1YCL054W GEA2P39993 1459 aaKnown RBP3.5□□□□□ -1.85
SPB1YCL054W NUP159P40477 1460 aa3.5□□□□□ -1.85
SPB1YCL054W HEM13P11353 328 aaKnown RBP3.49□□□□□ -1.85
SPB1YCL054W MAC1P35192 417 aa3.49□□□□□ -1.85
SPB1YCL054W SKN7P38889 622 aa3.49□□□□□ -1.85
SPB1YCL054W MNN1P39106 762 aa3.49□□□□□ -1.85
SPB1YCL054W MRPS18P42847 217 aa3.49□□□□□ -1.85
SPB1YCL054W CWC24P53769 259 aa3.49□□□□□ -1.85
SPB1YCL054W TY1B-JR2P47100 1755 aaKnown RBP3.49□□□□□ -1.85
SPB1YCL054W TY1B-ER2Q03619 1755 aa3.49□□□□□ -1.85
SPB1YCL054W TY1B-MR1Q04214 1755 aa3.49□□□□□ -1.85
SPB1YCL054W TY1B-MR2Q04670 1755 aaKnown RBP3.49□□□□□ -1.85
SPB1YCL054W TY1B-LR1Q12088 1755 aaKnown RBP3.49□□□□□ -1.85
SPB1YCL054W TY1B-NL1Q12112 1755 aa3.49□□□□□ -1.85
SPB1YCL054W TY1B-GR1Q12141 1755 aa3.49□□□□□ -1.85
SPB1YCL054W TY1B-BLQ12490 1755 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 254.6 ms