RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSH1	YBR283C	YJU3	P28321	313 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	RTG2	P32608	588 aa	Known RBP	4.75	□□□□□ -1.65
SSH1	YBR283C	SLA1	P32790	1244 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	ECM21	P38167	1117 aa	Known RBP	4.75	□□□□□ -1.65
SSH1	YBR283C	RAD26	P40352	1085 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	BDP1	P46678	594 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	SMC3	P47037	1230 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	PUS6	P53294	404 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	UBP16	Q02863	499 aa		4.75	□□□□□ -1.65
SSH1	YBR283C	DDP1	Q99321	188 aa	Known RBP	4.75	□□□□□ -1.65
SSH1	YBR283C	MAK16	P10962	306 aa	Predicted RBP	4.74	□□□□□ -1.65
SSH1	YBR283C	NUD1	P32336	851 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	BIO2	P32451	375 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	PRX1	P34227	261 aa	Known RBP	4.74	□□□□□ -1.65
SSH1	YBR283C	RSC30	P38781	883 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	SPO22	P40511	975 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	YJR008W	P47085	338 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	MRPS35	P53292	345 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	ERO1	Q03103	563 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	FPR4	Q06205	392 aa	Predicted RBP	4.74	□□□□□ -1.65
SSH1	YBR283C	SUB2	Q07478	446 aa	Known RBP	4.74	□□□□□ -1.65
SSH1	YBR283C	YPL150W	Q12152	901 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	PSH1	Q12161	406 aa		4.74	□□□□□ -1.65
SSH1	YBR283C	TTI1	P36097	1038 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	GEF1	P37020	779 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	PEX14	P53112	341 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	NAF1	P53919	492 aa	Known RBP	4.73	□□□□□ -1.65
SSH1	YBR283C	TBF1	Q02457	562 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	SAS4	Q04003	481 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	YDR344C	Q05510	147 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	BRE1	Q07457	700 aa	Known RBP	4.73	□□□□□ -1.65
SSH1	YBR283C	SFI1	Q12369	946 aa		4.73	□□□□□ -1.65
SSH1	YBR283C	NOP14	Q99207	810 aa	Known RBP	4.73	□□□□□ -1.65
SSH1	YBR283C	CPA2	P03965	1118 aa	Known RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	SUP45	P12385	437 aa	Known RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	RET1	P22276	1149 aa	Known RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	NGR1	P32831	672 aa	Known RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	SSF1	P38789	453 aa	Predicted RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	UBP12	P39538	1254 aa		4.72	□□□□□ -1.65
SSH1	YBR283C	ARH1	P48360	493 aa		4.72	□□□□□ -1.65
SSH1	YBR283C	YNL108C	P53929	270 aa		4.72	□□□□□ -1.65
SSH1	YBR283C	YPL062W	Q02781	134 aa		4.72	□□□□□ -1.65
SSH1	YBR283C	VPS60	Q03390	229 aa		4.72	□□□□□ -1.65
SSH1	YBR283C	SYF1	Q04048	859 aa	Predicted RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	DIB1	Q06819	143 aa	Predicted RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	TRS33	Q99394	268 aa		4.72	□□□□□ -1.65
SSH1	YBR283C	SSK22	P25390	1331 aa	Predicted RBP	4.72	□□□□□ -1.65
SSH1	YBR283C	PET111	P08468	800 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	RDS1	P25611	832 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	MNR2	P35724	969 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	CTF18	P49956	741 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	YGL242C	P53066	181 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	RPT4	P53549	437 aa	Known RBP	4.71	□□□□□ -1.66
SSH1	YBR283C	ELP4	Q02884	456 aa	Known RBP	4.71	□□□□□ -1.66
SSH1	YBR283C	PSK2	Q08217	1101 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	ELG1	Q12050	791 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	PDR18	P53756	1333 aa		4.71	□□□□□ -1.66
SSH1	YBR283C	SES1	P07284	462 aa	Known RBP	4.7	□□□□□ -1.66
SSH1	YBR283C	KEX2	P13134	814 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	TRM1	P15565	570 aa	Known RBP	4.7	□□□□□ -1.66
SSH1	YBR283C	TPM1	P17536	199 aa	Known RBP	4.7	□□□□□ -1.66
SSH1	YBR283C	MRC1	P25588	1096 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	MGM1	P32266	881 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	YKU70	P32807	602 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	KTR3	P38130	404 aa	Predicted RBP	4.7	□□□□□ -1.66
SSH1	YBR283C	MAL33	P38157	468 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	GSM1	P42950	618 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	MLC1	P53141	149 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	BNI4	P53858	892 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	ALO1	P54783	526 aa	Known RBP	4.7	□□□□□ -1.66
SSH1	YBR283C	THI3	Q07471	609 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	NCB2	Q92317	146 aa		4.7	□□□□□ -1.66
SSH1	YBR283C	FAS2	P19097	1887 aa	Known RBP	4.7	□□□□□ -1.66
SSH1	YBR283C	ERG12	P07277	443 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	GPA1	P08539	472 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	MSH1	P25846	959 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	MFT1	P33441	392 aa	Known RBP	4.69	□□□□□ -1.66
SSH1	YBR283C	RFT1	P38206	574 aa	Predicted RBP	4.69	□□□□□ -1.66
SSH1	YBR283C	YHL017W	P38745	532 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	SPL2	P38839	148 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	ICP55	P40051	511 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	YPT11	P48559	417 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	RMD1	Q03441	430 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	SGD1	Q06132	899 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	GAS5	Q08193	484 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	DPH6	Q12429	685 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	STE11	P23561	717 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	KRE2	P27809	442 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	TFG2	P41896	400 aa	Predicted RBP	4.69	□□□□□ -1.66
SSH1	YBR283C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
SSH1	YBR283C	ECM23	Q02710	187 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	COG4	Q06096	861 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	TOS4	Q06266	489 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	ATG20	Q07528	640 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	SNU66	Q12420	587 aa	Predicted RBP	4.69	□□□□□ -1.66
SSH1	YBR283C	GRX6	Q12438	231 aa		4.69	□□□□□ -1.66
SSH1	YBR283C	THS1	P04801	734 aa	Known RBP	4.68	□□□□□ -1.66
SSH1	YBR283C	MATALPHA2	P0CY08	210 aa		4.68	□□□□□ -1.66
SSH1	YBR283C	HMLALPHA2	P0CY09	210 aa		4.68	□□□□□ -1.66
SSH1	YBR283C	PAT1	P25644	796 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms