RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	GAS5	Q08193	484 aa		6.63	□□□□□ -1.35
ECM1	YAL059W	YCK2	P23292	546 aa	Known RBP	6.62	□□□□□ -1.35
ECM1	YAL059W	MCM5	P29496	775 aa	Known RBP	6.62	□□□□□ -1.35
ECM1	YAL059W	POL5	P39985	1022 aa	Known RBP	6.62	□□□□□ -1.35
ECM1	YAL059W	PRY1	P47032	299 aa		6.62	□□□□□ -1.35
ECM1	YAL059W	BUD9	P53226	547 aa		6.62	□□□□□ -1.35
ECM1	YAL059W	UGA4	P32837	571 aa		6.61	□□□□□ -1.35
ECM1	YAL059W	FAA3	P39002	694 aa		6.61	□□□□□ -1.35
ECM1	YAL059W	RVS167	P39743	482 aa	Known RBP	6.61	□□□□□ -1.35
ECM1	YAL059W	SLN1	P39928	1220 aa	Predicted RBP	6.61	□□□□□ -1.35
ECM1	YAL059W	OSW7	P43611	510 aa		6.61	□□□□□ -1.35
ECM1	YAL059W	ELG1	Q12050	791 aa		6.61	□□□□□ -1.35
ECM1	YAL059W	HTS1	P07263	546 aa	Known RBP	6.6	□□□□□ -1.35
ECM1	YAL059W	YJR107W	P47145	328 aa		6.6	□□□□□ -1.35
ECM1	YAL059W	AI3	P03877	415 aa		6.59	□□□□□ -1.35
ECM1	YAL059W	KAR2	P16474	682 aa	Known RBP	6.59	□□□□□ -1.35
ECM1	YAL059W	SKN7	P38889	622 aa		6.59	□□□□□ -1.35
ECM1	YAL059W	DSE4	P53753	1117 aa		6.59	□□□□□ -1.35
ECM1	YAL059W	YIG1	Q08956	461 aa		6.59	□□□□□ -1.35
ECM1	YAL059W	GIN4	Q12263	1142 aa		6.59	□□□□□ -1.35
ECM1	YAL059W	TY1A-NL1	Q12391	440 aa	Known RBP	6.59	□□□□□ -1.35
ECM1	YAL059W	HXK1	P04806	485 aa	Known RBP	6.58	□□□□□ -1.36
ECM1	YAL059W	ERS1	P17261	260 aa		6.58	□□□□□ -1.36
ECM1	YAL059W	SFA1	P32771	386 aa		6.58	□□□□□ -1.36
ECM1	YAL059W	FYV10	P40492	516 aa		6.58	□□□□□ -1.36
ECM1	YAL059W	ULP1	Q02724	621 aa		6.58	□□□□□ -1.36
ECM1	YAL059W	MCM2	P29469	868 aa		6.57	□□□□□ -1.36
ECM1	YAL059W	MAE1	P36013	669 aa	Known RBP	6.57	□□□□□ -1.36
ECM1	YAL059W	TAT1	P38085	619 aa		6.57	□□□□□ -1.36
ECM1	YAL059W	YGR122W	P53272	402 aa		6.57	□□□□□ -1.36
ECM1	YAL059W	RNH70	P53331	553 aa		6.57	□□□□□ -1.36
ECM1	YAL059W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-DR6	P0CX70	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-ER1	P0CX71	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-LR2	P0CX72	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-PL	P0CX73	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-JR1	P0CX74	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-LR3	P0CX75	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-ML2	P0CX76	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	UTP22	P53254	1237 aa	Predicted RBP	6.56	□□□□□ -1.36
ECM1	YAL059W	RGA2	Q06407	1009 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	UBX5	Q06682	500 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	BUD21	Q08492	214 aa	Predicted RBP	6.56	□□□□□ -1.36
ECM1	YAL059W	MCA1	Q08601	432 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-GR1	Q12085	440 aa		6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.56	□□□□□ -1.36
ECM1	YAL059W	TY1A-OL	Q92392	440 aa	Known RBP	6.56	□□□□□ -1.36
ECM1	YAL059W	SEC8	P32855	1065 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	TOM20	P35180	183 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	RPS26A	P39938	119 aa	Known RBP	6.55	□□□□□ -1.36
ECM1	YAL059W	RPS26B	P39939	119 aa	Known RBP	6.55	□□□□□ -1.36
ECM1	YAL059W	RSM26	P47141	266 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	GCV1	P48015	400 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	YPL109C	Q02981	657 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	YMR074C	Q04773	145 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	SPR28	Q04921	423 aa		6.55	□□□□□ -1.36
ECM1	YAL059W	SQT1	P35184	431 aa		6.54	□□□□□ -1.36
ECM1	YAL059W	RRP14	P36080	434 aa	Known RBP	6.54	□□□□□ -1.36
ECM1	YAL059W	EXO5	P38289	585 aa		6.54	□□□□□ -1.36
ECM1	YAL059W	SHU2	P38957	223 aa		6.54	□□□□□ -1.36
ECM1	YAL059W	KIP3	P53086	805 aa	Known RBP	6.54	□□□□□ -1.36
ECM1	YAL059W	TPO2	P53283	614 aa		6.54	□□□□□ -1.36
ECM1	YAL059W	NOG1	Q02892	647 aa	Known RBP	6.54	□□□□□ -1.36
ECM1	YAL059W	ADI1	Q03677	179 aa		6.54	□□□□□ -1.36
ECM1	YAL059W	SVF1	Q05515	481 aa		6.54	□□□□□ -1.36
ECM1	YAL059W	CYC8	P14922	966 aa		6.53	□□□□□ -1.36
ECM1	YAL059W	RSC6	P25632	483 aa		6.53	□□□□□ -1.36
ECM1	YAL059W	ARI1	P53111	347 aa	Known RBP	6.53	□□□□□ -1.36
ECM1	YAL059W	PEX13	P80667	386 aa		6.53	□□□□□ -1.36
ECM1	YAL059W	OYE2	Q03558	400 aa	Known RBP	6.53	□□□□□ -1.36
ECM1	YAL059W	RAD2	P07276	1031 aa		6.52	□□□□□ -1.37
ECM1	YAL059W	MSH3	P25336	1018 aa		6.52	□□□□□ -1.37
ECM1	YAL059W	PPG1	P32838	368 aa		6.52	□□□□□ -1.37
ECM1	YAL059W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.52	□□□□□ -1.37	not detected
ECM1	YAL059W	CCT8	P47079	568 aa	Known RBP	6.52	□□□□□ -1.37
ECM1	YAL059W	MDG1	P53885	366 aa		6.52	□□□□□ -1.37
ECM1	YAL059W	MEC3	Q02574	474 aa		6.52	□□□□□ -1.37
ECM1	YAL059W	YOL098C	Q12496	1037 aa		6.52	□□□□□ -1.37
ECM1	YAL059W	YKL077W	P36081	392 aa		6.51	□□□□□ -1.37
ECM1	YAL059W	PEX28	P38848	579 aa		6.51	□□□□□ -1.37
ECM1	YAL059W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.51	□□□□□ -1.37	not detected
ECM1	YAL059W	NCE103	P53615	221 aa		6.51	□□□□□ -1.37
ECM1	YAL059W	YOR223W	Q12015	292 aa		6.51	□□□□□ -1.37
ECM1	YAL059W	REC8	Q12188	680 aa		6.51	□□□□□ -1.37
ECM1	YAL059W	PRE9	P23638	258 aa	Known RBP	6.5	□□□□□ -1.37
ECM1	YAL059W	NEM1	P38757	446 aa		6.5	□□□□□ -1.37
ECM1	YAL059W	FPR3	P38911	411 aa	Known RBP	6.5	□□□□□ -1.37
ECM1	YAL059W	PIC2	P40035	300 aa		6.5	□□□□□ -1.37
ECM1	YAL059W	LSB3	P43603	459 aa	Known RBP	6.5	□□□□□ -1.37
ECM1	YAL059W	MTC5	Q03897	1148 aa		6.5	□□□□□ -1.37
ECM1	YAL059W	MCD1	Q12158	566 aa		6.5	□□□□□ -1.37
ECM1	YAL059W	YLL054C	Q12244	843 aa		6.5	□□□□□ -1.37
ECM1	YAL059W	TSR4	P25040	408 aa		6.49	□□□□□ -1.37
ECM1	YAL059W	REI1	P38344	393 aa	Predicted RBP	6.49	□□□□□ -1.37
ECM1	YAL059W	MRPS18	P42847	217 aa		6.49	□□□□□ -1.37
ECM1	YAL059W	SLS1	P42900	643 aa		6.49	□□□□□ -1.37
ECM1	YAL059W	YPL034W	Q03083	165 aa		6.49	□□□□□ -1.37
ECM1	YAL059W	ALG6	Q12001	544 aa	Known RBP	6.49	□□□□□ -1.37
ECM1	YAL059W	ARL1	P38116	183 aa	Known RBP	6.48	□□□□□ -1.37
ECM1	YAL059W	AKR1	P39010	764 aa		6.48	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 133.9 ms