RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 PPFIA4O75335 1185 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 ITGAEP38570 1179 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 TNNI2P48788 182 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 LONRF3Q496Y0 759 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 PLEKHM2Q8IWE5 1019 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 MICALL2Q8IY33 904 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 RGL4Q8IZJ4 473 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 TMTC2Q8N394 836 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 NFATC2IPQ8NCF5 419 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 C1orf216Q8TAB5 229 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 EPS8L1Q8TE68 723 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 MRFAP1L1Q96HT8 127 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 EPAS1Q99814 870 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 PCDH12Q9NPG4 1184 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 IFT57Q9NWB7 429 aa4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 MKRN1Q9UHC7 482 aaKnown RBP4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 MRPL42Q9Y6G3 142 aaKnown RBP4.58□□□□□ -1.68
CHRNA4-220ENST00000637628 HOXA2O43364 376 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 C21orf2O43822 256 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 PRMT3O60678 531 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 STK10O94804 968 aaKnown RBP4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 P4HBP07237 508 aaKnown RBP4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 ZEB1P37275 1124 aaPredicted RBP4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 ARID5AQ03989 594 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 RBL2Q08999 1139 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 PTK7Q13308 1070 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 SWI5Q1ZZU3 235 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 ZFYVE27Q5T4F4 411 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 ANKMY2Q8IV38 441 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 SULF1Q8IWU6 871 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 IRF2BPLQ9H1B7 796 aa4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 METTL5Q9NRN9 209 aaKnown RBP4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.57□□□□□ -1.68
CHRNA4-220ENST00000637628 DDX11L8A8MPP1 907 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 ATP5J2-PTCD1G3V325 749 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 DNAJC6O75061 913 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 PHF14O94880 888 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 PAX3P23760 479 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 ZNF76P36508 570 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 FANCCQ00597 558 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 DPYDQ12882 1025 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 PDE3BQ13370 1112 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 BIRC2Q13490 618 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 NFE2L2Q16236 605 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 LDLRAD1Q5T700 205 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 FMNL3Q8IVF7 1028 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 REM2Q8IYK8 340 aaPredicted RBP4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 FAM9BQ8IZU0 186 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 EVI5LQ96CN4 794 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 PKNOX2Q96KN3 472 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 FAM161BQ96MY7 647 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 GMLQ99445 158 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 SPC25Q9HBM1 224 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 VTI1BQ9UEU0 232 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 PNMA2Q9UL42 364 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 PRR12Q9ULL5 1215 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 INPP5FQ9Y2H2 1132 aa4.56□□□□□ -1.68
CHRNA4-220ENST00000637628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 PPP1R12AO14974 1030 aaPredicted RBP4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 APLP1P51693 650 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 TBX4P57082 545 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 RHBDL3P58872 404 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 SLFNL1Q499Z3 407 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 TSHZ1Q6ZSZ6 1077 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 NME8Q8N427 588 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 PRPF38AQ8NAV1 312 aaKnown RBP4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 JDP2Q8WYK2 163 aa4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 DDX56Q9NY93 547 aaKnown RBP4.55□□□□□ -1.68
CHRNA4-220ENST00000637628 KIF3CO14782 793 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 PRC1O43663 620 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 SORBS3O60504 671 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 WDHD1O75717 1129 aaPredicted RBP4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 FMNL1O95466 1100 aaPredicted RBP4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 FDX1P10109 184 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 XRCC5P13010 732 aaKnown RBP4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 NCOA4Q13772 614 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 NR6A1Q15406 480 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 ENOX2Q16206 610 aaKnown RBP4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 RNF135Q8IUD6 432 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 SLF2Q8IX21 1173 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 PARP2Q9UGN5 583 aa4.54□□□□□ -1.68
CHRNA4-220ENST00000637628 LDHBP07195 334 aaKnown RBP4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 FOXD4Q12950 439 aaPredicted RBP4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 NR1H3Q13133 447 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 PSMD2Q13200 908 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 C4orf46Q504U0 113 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 DPY19L2Q6NUT2 758 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 VPS37DQ86XT2 251 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 RPUSD2Q8IZ73 545 aaKnown RBP4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 CERKQ8TCT0 537 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 GTF3C2Q8WUA4 911 aaPredicted RBP4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 ZNF594Q96JF6 807 aaPredicted RBP4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 PRIMPOLQ96LW4 560 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 RPS6KC1Q96S38 1066 aa4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 CXXC1Q9P0U4 656 aaPredicted RBP4.53□□□□□ -1.68
CHRNA4-220ENST00000637628 RCCD1A6NED2 376 aa4.52□□□□□ -1.69
CHRNA4-220ENST00000637628 G3V3G9 751 aa4.52□□□□□ -1.69
CHRNA4-220ENST00000637628 K7ELQ4 463 aaPredicted RBP4.52□□□□□ -1.69
CHRNA4-220ENST00000637628 ENPP3O14638 875 aa4.52□□□□□ -1.69
CHRNA4-220ENST00000637628 PRPF40AO75400 957 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms