RNA–Protein interactions for RNA: ENST00000636481.1

CHRNA4-215, Transcript of cholinergic receptor nicotinic alpha 4 subunit, human

TSL 5

Gene CHRNA4, Length 126 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA4-215	ENST00000636481	PNPLA7	Q6ZV29	1317 aa		4.21	□□□□□ -1.74
CHRNA4-215	ENST00000636481	IGSF1	Q8N6C5	1336 aa		4.21	□□□□□ -1.74
CHRNA4-215	ENST00000636481	NRXN1	Q9ULB1	1477 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	ABCC11	Q96J66	1382 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	CSB-PGBD3	P0DP91	1061 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	ABTB2	Q8N961	1025 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	SMC1B	Q8NDV3	1235 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	PRDM10	Q9NQV6	1147 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	MKRN1	Q9UHC7	482 aa	Known RBP	4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	ADGRF5	Q8IZF2	1346 aa		4.2	□□□□□ -1.74
CHRNA4-215	ENST00000636481	CTCF	P49711	727 aa	Predicted RBP	4.19	□□□□□ -1.74
CHRNA4-215	ENST00000636481	LBX1	P52954	281 aa		4.19	□□□□□ -1.74
CHRNA4-215	ENST00000636481	COL23A1	Q86Y22	540 aa	Predicted RBP	4.19	□□□□□ -1.74
CHRNA4-215	ENST00000636481	BCS1L	Q9Y276	419 aa		4.19	□□□□□ -1.74
CHRNA4-215	ENST00000636481	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.19	□□□□□ -1.74
CHRNA4-215	ENST00000636481	ANKRD30B	Q9BXX2	1392 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	GC	P02774	474 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	C9orf131	Q5VYM1	1079 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	SYTL4	Q96C24	671 aa	Predicted RBP	4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	SIRT1	Q96EB6	747 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	KIF1A	Q12756	1690 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	CRB1	P82279	1406 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	KDM2B	Q8NHM5	1336 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	PRR36	Q9H6K5	1346 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	ATP7B	P35670	1465 aa		4.18	□□□□□ -1.74
CHRNA4-215	ENST00000636481	BRD4	O60885	1362 aa	Predicted RBP	4.17	□□□□□ -1.74
CHRNA4-215	ENST00000636481	FCHSD2	O94868	740 aa		4.17	□□□□□ -1.74
CHRNA4-215	ENST00000636481	RGS19	P49795	217 aa		4.17	□□□□□ -1.74
CHRNA4-215	ENST00000636481	SLC27A3	Q5K4L6	730 aa		4.17	□□□□□ -1.74
CHRNA4-215	ENST00000636481	NLRP13	Q86W25	1043 aa		4.17	□□□□□ -1.74
CHRNA4-215	ENST00000636481	PRAG1	Q86YV5	1406 aa		4.17	□□□□□ -1.74
CHRNA4-215	ENST00000636481		E9PCH4	1651 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	USP6	P35125	1406 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481		A0A0G2JLW4	131 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	WASL	O00401	505 aa	Predicted RBP	4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	SOX12	O15370	315 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	CFAP70	Q5T0N1	1121 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	DDX54	Q8TDD1	881 aa	Known RBP	4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	NUDT16	Q96DE0	195 aa	Known RBP	4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	RNF181	Q9P0P0	153 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	CCNL1	Q9UK58	526 aa	Predicted RBP	4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	TRAK1	Q9UPV9	953 aa		4.16	□□□□□ -1.74
CHRNA4-215	ENST00000636481	WDR90	Q96KV7	1748 aa		4.15	□□□□□ -1.74
CHRNA4-215	ENST00000636481	ANKAR	Q7Z5J8	1434 aa		4.15	□□□□□ -1.74
CHRNA4-215	ENST00000636481	IQGAP3	Q86VI3	1631 aa		4.15	□□□□□ -1.74
CHRNA4-215	ENST00000636481	NLRP6	P59044	892 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	SMIM5	Q71RC9	77 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CARD10	Q9BWT7	1032 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	AXIN2	Q9Y2T1	843 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CROCC2	H7BZ55	1655 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ACE	P12821	1306 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	WDR17	Q8IZU2	1322 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ABCA3	Q99758	1704 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	FMN2	Q9NZ56	1722 aa		4.15	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CPD	O75976	1380 aa		4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	BCL9	O00512	1426 aa		4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	COL5A2	P05997	1499 aa	Predicted RBP	4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PHF14	O94880	888 aa		4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	HSPA8	P11142	646 aa	Known RBP	4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	VEGFA	P15692	232 aa	Predicted RBP	4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PRIM1	P49642	420 aa	Known RBP	4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	FLAD1	Q8NFF5	587 aa		4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	NLRP2	Q9NX02	1062 aa		4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	TULP4	Q9NRJ4	1543 aa		4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	EIF3A	Q14152	1382 aa	Known RBP	4.14	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	KCP	Q6ZWJ8	1503 aa		4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	VEGFB	P49765	207 aa		4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	C14orf93	Q9H972	538 aa	Known RBP	4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CREBZF	Q9NS37	354 aa		4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	WBP1L	Q9NX94	342 aa		4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CLTCL1	P53675	1640 aa		4.13	□□□□□ -1.75
CHRNA4-215	ENST00000636481	IL2RB	P14784	551 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	DPEP1	P16444	411 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	TGFB2	P61812	414 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PRPF38B	Q5VTL8	546 aa	Known RBP	4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	AK7	Q96M32	723 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	BEGAIN	Q9BUH8	593 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CDK19	Q9BWU1	502 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ZNF219	Q9P2Y4	722 aa	Predicted RBP	4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PLEKHG2	Q9H7P9	1386 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PEAK1	Q9H792	1746 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	RGPD4	Q7Z3J3	1758 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	VPS8	Q8N3P4	1428 aa		4.12	□□□□□ -1.75
CHRNA4-215	ENST00000636481	TOPAZ1	Q8N9V7	1692 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	DLL1	O00548	723 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	MMP10	P09238	476 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	SOX10	P56693	466 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	GRM1	Q13255	1194 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	MCOLN1	Q9GZU1	580 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	TSKS	Q9UJT2	592 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CCDC61	Q9Y6R9	512 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ERBB3	P21860	1342 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CNTNAP1	P78357	1384 aa		4.11	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CCDC7	Q96M83	1385 aa		4.11	□□□□□ -1.75

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