RNA–Protein interactions for RNA: ENST00000635530.1

SMARCA2-242, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-242ENST00000635530 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-242ENST00000635530 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
SMARCA2-242ENST00000635530 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-242ENST00000635530 A0A0G2JS52 829 aa12.27□□□□□ -0.45
SMARCA2-242ENST00000635530 TSGA10IPQ3SY00 556 aa12.27□□□□□ -0.45
SMARCA2-242ENST00000635530 NBPF20Q3BBV1 942 aa12.26□□□□□ -0.45
SMARCA2-242ENST00000635530 DEPDC4Q8N2C3 294 aa12.26□□□□□ -0.45
SMARCA2-242ENST00000635530 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
SMARCA2-242ENST00000635530 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
SMARCA2-242ENST00000635530 MAP4K5Q9Y4K4 846 aa12.26□□□□□ -0.45
SMARCA2-242ENST00000635530 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
SMARCA2-242ENST00000635530 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
SMARCA2-242ENST00000635530 NCOA4Q13772 614 aa12.24□□□□□ -0.45
SMARCA2-242ENST00000635530 MAP7D1Q3KQU3 841 aa12.24□□□□□ -0.45
SMARCA2-242ENST00000635530 ATG7O95352 703 aa12.23□□□□□ -0.45
SMARCA2-242ENST00000635530 SLC19A1P41440 591 aa12.23□□□□□ -0.45
SMARCA2-242ENST00000635530 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
SMARCA2-242ENST00000635530 EHBP1Q8NDI1 1231 aa12.23□□□□□ -0.45
SMARCA2-242ENST00000635530 SIAH2O43255 324 aa12.22□□□□□ -0.45
SMARCA2-242ENST00000635530 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
SMARCA2-242ENST00000635530 CDK15Q96Q40 435 aa12.22□□□□□ -0.45
SMARCA2-242ENST00000635530 KCTD15Q96SI1 283 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-242ENST00000635530 LZTS3O60299 673 aaPredicted RBP12.21□□□□□ -0.45
SMARCA2-242ENST00000635530 INTS6LQ5JSJ4 861 aaKnown RBP12.21□□□□□ -0.45
SMARCA2-242ENST00000635530 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
SMARCA2-242ENST00000635530 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.45
SMARCA2-242ENST00000635530 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
SMARCA2-242ENST00000635530 WNT7AO00755 349 aa12.2□□□□□ -0.46
SMARCA2-242ENST00000635530 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
SMARCA2-242ENST00000635530 MPNDQ8N594 471 aa12.2□□□□□ -0.46
SMARCA2-242ENST00000635530 DOLKQ9UPQ8 538 aa12.2□□□□□ -0.46
SMARCA2-242ENST00000635530 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
SMARCA2-242ENST00000635530 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-242ENST00000635530 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
SMARCA2-242ENST00000635530 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-242ENST00000635530 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-242ENST00000635530 ZMIZ1Q9ULJ6 1067 aa12.18□□□□□ -0.46
SMARCA2-242ENST00000635530 GRM5P41594 1212 aa12.17□□□□□ -0.46
SMARCA2-242ENST00000635530 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-242ENST00000635530 EML3Q32P44 896 aa12.17□□□□□ -0.46
SMARCA2-242ENST00000635530 CRTC2Q53ET0 693 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-242ENST00000635530 MRGPRX2Q96LB1 330 aa12.17□□□□□ -0.46
SMARCA2-242ENST00000635530 FAM196BA6NMK8 535 aa12.16□□□□□ -0.46
SMARCA2-242ENST00000635530 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L15C9J2P7 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L13C9JLJ4 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L11C9JVI0 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L21D6R901 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L18D6R9N7 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L22D6RA61 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L17D6RBQ6 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L19D6RCP7 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L20D6RJB6 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 FSHRP23945 695 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 USP17L24Q0WX57 530 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 OXLD1Q5BKU9 147 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
SMARCA2-242ENST00000635530 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
SMARCA2-242ENST00000635530 CLDN10P78369 228 aa12.14□□□□□ -0.47
SMARCA2-242ENST00000635530 PTK7Q13308 1070 aa12.14□□□□□ -0.47
SMARCA2-242ENST00000635530 ZNF697Q5TEC3 545 aa12.14□□□□□ -0.47
SMARCA2-242ENST00000635530 ZNF598Q86UK7 904 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-242ENST00000635530 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
SMARCA2-242ENST00000635530 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
SMARCA2-242ENST00000635530 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
SMARCA2-242ENST00000635530 PRKD2Q9BZL6 878 aa12.13□□□□□ -0.47
SMARCA2-242ENST00000635530 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-242ENST00000635530 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 DKK1O94907 266 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 ADH1CP00326 375 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 RAB15P59190 212 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 STK32AQ8WU08 396 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
SMARCA2-242ENST00000635530 SCTRP47872 440 aa12.11□□□□□ -0.47
SMARCA2-242ENST00000635530 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
SMARCA2-242ENST00000635530 NR3C2P08235 984 aa12.1□□□□□ -0.47
SMARCA2-242ENST00000635530 RASA1P20936 1047 aa12.1□□□□□ -0.47
SMARCA2-242ENST00000635530 PCDHGA11Q9Y5H2 935 aa12.1□□□□□ -0.47
SMARCA2-242ENST00000635530 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-242ENST00000635530 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
SMARCA2-242ENST00000635530 TMEM164Q5U3C3 297 aa12.09□□□□□ -0.47
SMARCA2-242ENST00000635530 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
SMARCA2-242ENST00000635530 GTF2IP78347 998 aa12.08□□□□□ -0.48
SMARCA2-242ENST00000635530 NR5A1Q13285 461 aa12.08□□□□□ -0.48
SMARCA2-242ENST00000635530 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-242ENST00000635530 SIX5Q8N196 739 aa12.08□□□□□ -0.48
SMARCA2-242ENST00000635530 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms